RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 EYA3Q99504 573 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SH3GL1Q99961 368 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 MMADHCQ9H3L0 296 aaPredicted RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 SH2D4AQ9H788 454 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 FAM204AQ9H8W3 233 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 GPCPD1Q9NPB8 672 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 STIM2Q9P246 746 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 ANKIB1Q9P2G1 1089 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 INTUQ9ULD6 942 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 PAIP2BQ9ULR5 123 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 STX8Q9UNK0 236 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 ZNF148Q9UQR1 794 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 PCDHA13Q9Y5I0 950 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 COL4A3BPQ9Y5P4 624 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SPATA31A5Q5VU36 1347 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 SPATA31A7Q8IWB4 1347 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FOCADQ5VW36 1801 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 LOXHD1Q8IVV2 1947 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 GPR75-ASB3A0A0A6YYF3 556 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 PNMA6FA0A0J9YX94 578 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 B4DLN1 442 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 CCDC188H7C350 402 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 CETN3O15182 167 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 CALUO43852 315 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TBC1D12O60347 775 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 SHOX2O60902 331 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RNF40O75150 1001 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FLOT1O75955 427 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FOSP01100 380 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 HLA-DOAP06340 250 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TROVE2P10155 538 aaKnown RBP eCLIP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 MUTP22033 750 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RFX1P22670 979 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 GBP2P32456 591 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 NOVP48745 357 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FNTAP49354 379 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 KIF11P52732 1056 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 DYNLL1P63167 89 aaKnown RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 GOLGA8FQ08AF8 430 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 KCNA1Q09470 495 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 GOLGA8DPQ0D2H9 430 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 AP3B2Q13367 1082 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 COL19A1Q14993 1142 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 LETM2Q2VYF4 491 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 CCDC40Q4G0X9 1142 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FAM47AQ5JRC9 791 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 HYIQ5T013 277 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 ANKRD40Q6AI12 368 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 LRIG3Q6UXM1 1119 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RUFY4Q6ZNE9 571 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 ADGRA1Q86SQ6 560 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 C2CD5Q86YS7 1000 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 IRF2BP1Q8IU81 584 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 SMYD4Q8IYR2 804 aaPredicted RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 MREGQ8N565 214 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 VPS37AQ8NEZ2 397 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RAD54LQ92698 747 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 SPDL1Q96EA4 605 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 MS4A3Q96HJ5 214 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RBM41Q96IZ5 413 aaKnown RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 DHRS1Q96LJ7 313 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 CCDC17Q96LX7 622 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RUNDC3BQ96NL0 473 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TMEM47Q9BQJ4 181 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TCHPQ9BT92 498 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FAM129AQ9BZQ8 928 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 NACA2Q9H009 215 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RIOX1Q9H6W3 641 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 ZSWIM4Q9H7M6 989 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 MMRN2Q9H8L6 949 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 FBXL5Q9UKA1 691 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 HPCAL4Q9UM19 191 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 GDAQ9Y2T3 454 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TMED5Q9Y3A6 229 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 RTCBQ9Y3I0 505 aaKnown RBP5.99□□□□□ -1.45
GABPB1-207ENST00000558335 TACC3Q9Y6A5 838 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 IKBKGQ9Y6K9 419 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 UBE4BO95155 1302 aa5.99□□□□□ -1.45
GABPB1-207ENST00000558335 MYH14Q7Z406 1995 aaKnown RBP5.98□□□□□ -1.45
GABPB1-207ENST00000558335 A0A0A6YYK5 440 aaPredicted RBP5.98□□□□□ -1.45
GABPB1-207ENST00000558335 CCDC162PA2VCL2 907 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 GTPBP10A4D1E9 387 aaKnown RBP5.98□□□□□ -1.45
GABPB1-207ENST00000558335 SLC16A3O15427 465 aaKnown RBP5.98□□□□□ -1.45
GABPB1-207ENST00000558335 EVI5O60447 810 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 TTLL1O95922 423 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 HSPA6P17066 643 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 GAP43P17677 238 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 CNGA1P29973 690 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 ATICP31939 592 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 RANBP1P43487 201 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 NPEPPSP55786 919 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 HERVK_113P62684 666 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 SKOR1P84550 965 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 BIRC3Q13489 604 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 NAA25Q14CX7 972 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 IL17AQ16552 155 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 TXNRD1Q16881 649 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 Q4G0T1 1027 aa5.98□□□□□ -1.45
GABPB1-207ENST00000558335 EARS2Q5JPH6 523 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms