RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 VTI1AQ96AJ9 217 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 IFIH1Q9BYX4 1025 aaKnown RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 MAF1Q9H063 256 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 KCTD10Q9H3F6 313 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 TDRD3Q9H7E2 651 aaKnown RBP9.17□□□□□ -0.94
SPG11-209ENST00000558253 PLCB1Q9NQ66 1216 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 AIPL1Q9NZN9 384 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 PRR12Q9ULL5 1215 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 PCDHA13Q9Y5I0 950 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 MYH8P13535 1937 aa9.17□□□□□ -0.94
SPG11-209ENST00000558253 BTNL10A8MVZ5 291 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 PPP1R12BO60237 982 aaPredicted RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 TBCAO75347 108 aaKnown RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 GFPT2O94808 682 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 CLSTN1O94985 981 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 SSBP05455 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPG11-209ENST00000558253 FDX1P10109 184 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 BCRP11274 1271 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 EPS15P42566 896 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 KIF11P52732 1056 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 SLC20A2Q08357 652 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 PPP2R5CQ13362 524 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 ADAM9Q13443 819 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 ALCAMQ13740 583 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 IFI16Q16666 785 aaKnown RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 AOC3Q16853 763 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 EPM2AIP1Q7L775 607 aaPredicted RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 CATSPER3Q86XQ3 398 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 MCF2L2Q86YR7 1114 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 TTLL6Q8N841 843 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 TMEM174Q8WUU8 243 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 SCFD1Q8WVM8 642 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 BAP1Q92560 729 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 CALR3Q96L12 384 aaKnown RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 GMLQ99445 158 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 RIT2Q99578 217 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 UBXN6Q9BZV1 441 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 TANGO6Q9C0B7 1094 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 VIPAS39Q9H9C1 493 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 TYW1Q9NV66 732 aaKnown RBP9.16□□□□□ -0.94
SPG11-209ENST00000558253 BRWD3Q6RI45 1802 aa9.16□□□□□ -0.94
SPG11-209ENST00000558253 COL11A2P13942 1736 aaPredicted RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 POTECB2RU33 542 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 E9PMD0 336 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 MAP2K7O14733 419 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 MSH4O15457 936 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 RAD21O60216 631 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 MED24O75448 989 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 CCDC172P0C7W6 258 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 SPATA31C1P0DKV0 1188 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 MAPTP10636 758 aaKnown RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 MAGEA1P43355 309 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 SNRPFP62306 86 aaKnown RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 GIT2Q14161 759 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 TNIP1Q15025 636 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 TERF2Q15554 542 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 ECM1Q16610 540 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 LONRF2Q1L5Z9 754 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 GLE1Q53GS7 698 aaKnown RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 NCAPH2Q6IBW4 605 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 LRRN4CLQ8ND94 238 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 SLC17A8Q8NDX2 589 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 LPAR1Q92633 364 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 SLC5A5Q92911 643 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 LENG9Q96B70 501 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 PRMT6Q96LA8 375 aaPredicted RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 NOX5Q96PH1 765 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 NACC1Q96RE7 527 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 HSD17B14Q9BPX1 270 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 TIPINQ9BVW5 301 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 VCPKMTQ9H867 229 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 FAM207AQ9NSI2 230 aaPredicted RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 ZNF70Q9UC06 446 aaPredicted RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
SPG11-209ENST00000558253 VAV3Q9UKW4 847 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 ODF2LQ9ULJ1 636 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 SNX12Q9UMY4 172 aa9.15□□□□□ -0.94
SPG11-209ENST00000558253 A0A0U1RQG5 324 aaPredicted RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 CES2O00748 559 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 OATP04181 439 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 ASNSP08243 561 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 EPB41P11171 864 aaKnown RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
SPG11-209ENST00000558253 PAFAH1B1P43034 410 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 PRELPP51888 382 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 CACNB3P54284 484 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 USP14P54578 494 aa9.14□□□□□ -0.95
SPG11-209ENST00000558253 GHRHRQ02643 423 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms