RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 FAM186BQ8IYM0 893 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 NMD3Q96D46 503 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 MEIS3Q99687 375 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 CLASP2O75122 1294 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 RAB11FIP3O75154 756 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 CSPG5O95196 566 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 GYPCP04921 128 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 VHLP40337 213 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 VAV2P52735 878 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 WASHC5Q12768 1159 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 DIXDC1Q155Q3 683 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 RNF113AO15541 343 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 ZNF844Q08AG5 666 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 PPP2R5BQ15173 497 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 CYTH1Q15438 398 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 SNRNP48Q6IEG0 339 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 WAPLQ7Z5K2 1190 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 LRRC34Q8IZ02 419 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 VMP1Q96GC9 406 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 OLFM3Q96PB7 478 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 ELAC2Q9BQ52 826 aaKnown RBP11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 TFR2Q9UP52 801 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 CAPN6Q9Y6Q1 641 aa11.93□□□□□ -0.5
SEMA4B-204ENST00000558065 H3BQV1 296 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CDK2AP1O14519 115 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 NR1D2Q14995 579 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 BEND3Q5T5X7 828 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 PCNX4Q63HM2 1172 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CCBE1Q6UXH8 406 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 TMTC1Q8IUR5 882 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 OR2W6PQ8NHA6 318 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 MDM1Q8TC05 714 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 GIPC2Q8TF65 315 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 SCG3Q8WXD2 468 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.92□□□□□ -0.56e-6■■■■■ 28.1
SEMA4B-204ENST00000558065 ITPKCQ96DU7 683 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 LUC7L2Q9Y383 392 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 H0Y3Z8 333 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 MAP3K7O43318 606 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CYTH3O43739 400 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CTNND1O60716 968 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 MYCP01106 439 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 APOEP02649 317 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 PRKACBP22694 351 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 HSPA9P38646 679 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 GRIA2P42262 883 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 PRCPP42785 496 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 LMNB2Q03252 620 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 TRIM71Q2Q1W2 868 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 ODF2Q5BJF6 829 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 SIGIRRQ6IA17 410 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 ATXN2LQ8WWM7 1075 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 HAUS7Q99871 368 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 RSPH9Q9H1X1 276 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 TIMMDC1Q9NPL8 285 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 WWC3Q9ULE0 1092 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 SNX9Q9Y5X1 595 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 ANKARQ7Z5J8 1434 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 KIF20BQ96Q89 1820 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 AOX1Q06278 1338 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 NPHP3-ACAD11A0A0J9YXS1 232 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 ANKRD34BA5PLL1 514 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 ZSCAN5CA6NGD5 496 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 STK3Q13188 491 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 CERKLQ49MI3 558 aaPredicted RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 TTC8Q8TAM2 541 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 STK33Q9BYT3 514 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 FKBP14Q9NWM8 211 aa11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 LARSQ9P2J5 1176 aaKnown RBP11.92□□□□□ -0.5
SEMA4B-204ENST00000558065 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 NECTIN1Q15223 517 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 PARP6Q2NL67 630 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 AGBL2Q5U5Z8 902 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FBXO31Q5XUX0 539 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FAM13CQ8NE31 585 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 LILRB1Q8NHL6 650 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 ACMSDQ8TDX5 336 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 USP6NLQ92738 828 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 PARVBQ9HBI1 364 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 TYW1Q9NV66 732 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 DDX43Q9NXZ2 648 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 GTF3C4Q9UKN8 822 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 HBS1LQ9Y450 684 aaKnown RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 GOLGA8TH3BQL2 631 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 STRNO43815 780 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 ECE2O60344 883 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 GOLGA8HP0CJ92 632 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 MCCD1P59942 119 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 UAP1Q16222 522 aaPredicted RBP11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 WDR72Q3MJ13 1102 aa11.91□□□□□ -0.5
SEMA4B-204ENST00000558065 FAM47EQ6ZV65 393 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms