RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ERAP1Q9NZ08 941 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 GABBR1Q9UBS5 961 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 CHD9Q3L8U1 2897 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 IGKV6D-21A0A0A0MT36 114 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 POTEMA6NI47 508 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 DCDC2CA8MYV0 355 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 EML1O00423 815 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 DDIT3P35638 169 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 PRPHP41219 470 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 NBPF20Q3BBV1 942 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
RCCD1-209ENST00000557750 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
RCCD1-209ENST00000557750 MUC3AQ02505 3323 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 GRIN2DO15399 1336 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 ARVCFO00192 962 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 TIMP1P01033 207 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 PLPPR4Q7Z2D5 763 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 CKAP2LQ8IYA6 745 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 AFAP1L1Q8TED9 768 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.74□□□□□ -0.211e-8■■■□□ 18.1
RCCD1-209ENST00000557750 RAB34Q9BZG1 259 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 ZNF576Q9H609 170 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 TFIP11Q9UBB9 837 aaKnown RBP13.74□□□□□ -0.21
RCCD1-209ENST00000557750 TBX21Q9UL17 535 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
RCCD1-209ENST00000557750 VWA3AA6NCI4 1184 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 HAS3O00219 553 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 SLC26A2P50443 739 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
RCCD1-209ENST00000557750 DNM1Q05193 864 aaKnown RBP13.73□□□□□ -0.21
RCCD1-209ENST00000557750 STK38Q15208 465 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 EPHA7Q15375 998 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
RCCD1-209ENST00000557750 NFRKBQ6P4R8 1299 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 ATP6V0A1Q93050 837 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 RNPEPQ9H4A4 650 aa13.73□□□□□ -0.21
RCCD1-209ENST00000557750 MAFBQ9Y5Q3 323 aaPredicted RBP13.73□□□□□ -0.21
RCCD1-209ENST00000557750 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 MARCKSP29966 332 aaPredicted RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 PTPAQ15257 358 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 IL17AQ16552 155 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 UGCGQ16739 394 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 TJAP1Q5JTD0 557 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 EIF2AK1Q9BQI3 630 aaKnown RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 SEZ6LQ9BYH1 1024 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 RGL1Q9NZL6 768 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 LRWD1Q9UFC0 647 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 CIZ1Q9ULV3 898 aaPredicted RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 MROH7Q68CQ1 1323 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 IGSF9BQ9UPX0 1349 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 GRXCR1A8MXD5 290 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 PBX2P40425 430 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 NASPP49321 788 aaPredicted RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 CDK7P50613 346 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 PSMC5P62195 406 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 PRKCEQ02156 737 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 ATL3Q6DD88 541 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 SLC43A3Q8NBI5 491 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 ERMNQ8TAM6 284 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
RCCD1-209ENST00000557750 DYDC2Q96IM9 177 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 LXNQ9BS40 222 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
RCCD1-209ENST00000557750 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
RCCD1-209ENST00000557750 ATP4AP20648 1035 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 IGBP1P78318 339 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 PTPN11Q06124 597 aaPredicted RBP13.71□□□□□ -0.21
RCCD1-209ENST00000557750 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.21
RCCD1-209ENST00000557750 PDIA5Q14554 519 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 SLC39A14Q15043 492 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 HAUS3Q68CZ6 603 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 IGSF22Q8N9C0 903 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 LINC00301Q8NCQ3 95 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 NEK9Q8TD19 979 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 ATP8B4Q8TF62 1192 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 FAM167AQ96KS9 214 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 ZSWIM4Q9H7M6 989 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
RCCD1-209ENST00000557750 SETD4Q9NVD3 440 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 GTF2IRD1Q9UHL9 959 aa13.71□□□□□ -0.21
RCCD1-209ENST00000557750 NOD1Q9Y239 953 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms