RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 SHISA4Q96DD7 197 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 CLMNQ96JQ2 1002 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 WRNIP1Q96S55 665 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 ZNF287Q9HBT7 754 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 NYAP2Q9P242 653 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 PASKQ96RG2 1323 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 LRRC37A2A6NM11 1700 aa6.93□□□□□ -1.3
FOXN3-218ENST00000557718 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 ZBTB43O43298 467 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 PAX4O43316 350 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 GAS2O43903 313 aaKnown RBP6.92□□□□□ -1.3
FOXN3-218ENST00000557718 CTNND1O60716 968 aaKnown RBP6.92□□□□□ -1.3
FOXN3-218ENST00000557718 PHACTR2O75167 634 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 DDAH1O94760 285 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 PLEKHA8P1O95397 391 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 TTLL1O95922 423 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 TOP1P11387 765 aaKnown RBP6.92□□□□□ -1.3
FOXN3-218ENST00000557718 EDN3P14138 238 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 FDPSP14324 419 aaKnown RBP6.92□□□□□ -1.3
FOXN3-218ENST00000557718 NPR3P17342 541 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 ICA1Q05084 483 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 VGLL4Q14135 290 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 GRM4Q14833 912 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 RAB3GAP1Q15042 981 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 SUPT20HL1Q3ZLR7 823 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 LDLRAD1Q5T700 205 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 CST9Q5W186 159 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 DCAF15Q66K64 600 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 SCYL3Q8IZE3 742 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 SMARCC2Q8TAQ2 1214 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 CHMP4CQ96CF2 233 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 ZSCAN31Q96LW9 406 aaPredicted RBP6.92□□□□□ -1.3
FOXN3-218ENST00000557718 CPVLQ9H3G5 476 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 CLIP2Q9UDT6 1046 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 MAD2L2Q9UI95 211 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 STX8Q9UNK0 236 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
FOXN3-218ENST00000557718 THSD7BQ9C0I4 1608 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 CCDC69A6NI79 296 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 GOLGA8AA7E2F4 631 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 WDR64B1ANS9 1081 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 CYTH3O43739 400 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 NDUFB10O96000 172 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 ASNSP08243 561 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 PDHBP11177 359 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 RCAN1P53805 252 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 FGD1P98174 961 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 BECN1Q14457 450 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 SART3Q15020 963 aaKnown RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 NFXL1Q6ZNB6 911 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 TMTC3Q6ZXV5 915 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 SRBD1Q8N5C6 995 aaKnown RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 FANCBQ8NB91 859 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 SNX29Q8TEQ0 813 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 MAP3K14Q99558 947 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 NUP88Q99567 741 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 TMPRSS13Q9BYE2 586 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 BHLHE41Q9C0J9 482 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 KAT14Q9H8E8 782 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
FOXN3-218ENST00000557718 TMX2Q9Y320 296 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 SLC12A7Q9Y666 1083 aa6.91□□□□□ -1.3
FOXN3-218ENST00000557718 LOC100289279A0A1B0GTE1 492 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 ERICH2A1L162 156 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 F5H6K3 240 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 GOLGA8HP0CJ92 632 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 METAP2P50579 478 aaKnown RBP eCLIP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 ATP2B2Q01814 1243 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 KLRC3Q07444 240 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 EHHADHQ08426 723 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 ZNF543Q08ER8 600 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 MOGSQ13724 837 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 PKP1Q13835 747 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 SGO2Q562F6 1265 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 CCDC178Q5BJE1 867 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 PEAR1Q5VY43 1037 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 TTBK2Q6IQ55 1244 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 CATIPQ7Z7H3 387 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 TMTC2Q8N394 836 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 C12orf50Q8NA57 414 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 SMG8Q8ND04 991 aaKnown RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 GMCL1P1Q8NEA9 526 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 PHKBQ93100 1093 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 HOOK2Q96ED9 719 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 INTS4Q96HW7 963 aaKnown RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 MFSD14AQ96MC6 490 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 AIFM3Q96NN9 605 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 WDR18Q9BV38 432 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
FOXN3-218ENST00000557718 SUGCTQ9HAC7 445 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 CABP5Q9NP86 173 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 GJB4Q9NTQ9 266 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 GINM1Q9NU53 330 aa6.9□□□□□ -1.3
FOXN3-218ENST00000557718 NAP1L2Q9ULW6 460 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms