RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
SLIRP-210ENST00000557431 ITGB3BPQ13352 177 aaPredicted RBP16.12■□□□□ 0.17
SLIRP-210ENST00000557431 SMAD2Q15796 467 aaKnown RBP16.12■□□□□ 0.17
SLIRP-210ENST00000557431 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 LZTS2Q9BRK4 669 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 LMAN2LQ9H0V9 348 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 TMX1Q9H3N1 280 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 CDHR5Q9HBB8 845 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 KCNH7Q9NS40 1196 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 GINS2Q9Y248 185 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 RWDD3Q9Y3V2 267 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 SLC12A7Q9Y666 1083 aa16.12■□□□□ 0.17
SLIRP-210ENST00000557431 MGEA5O60502 916 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 ACTR2P61160 394 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 HFE2Q6ZVN8 426 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 SPPL3Q8TCT6 385 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 POF1BQ8WVV4 589 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 CD207Q9UJ71 328 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 FAM50BQ9Y247 325 aa16.11■□□□□ 0.17
SLIRP-210ENST00000557431 RRN3P2A6NIE6 340 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 ADAMTS3O15072 1205 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 NRIP1P48552 1158 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 NAPAP54920 295 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 NFX1Q12986 1120 aaKnown RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 PAK2Q13177 524 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 ADAM15Q13444 863 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 SMAD4Q13485 552 aaKnown RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 TRMT1LQ7Z2T5 733 aaKnown RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 RNF135Q8IUD6 432 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 CMTR2Q8IYT2 770 aaKnown RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 CRIPAKQ8N1N5 446 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 FANCBQ8NB91 859 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 CELF4Q9BZC1 486 aaKnown RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 BARX2Q9UMQ3 279 aaPredicted RBP16.1■□□□□ 0.17
SLIRP-210ENST00000557431 IGSF9BQ9UPX0 1349 aa16.1■□□□□ 0.17
SLIRP-210ENST00000557431 M0QZ92 97 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 STXBP3O00186 592 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 GLP2RO95838 553 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 CCNE2O96020 404 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 SCG2P13521 617 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 LIFRP42702 1097 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 STAT5BP51692 787 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 IER5Q5VY09 327 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 TMEM40Q8WWA1 233 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 MSLNLQ96KJ4 702 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 AGO4Q9HCK5 861 aaKnown RBP16.09■□□□□ 0.17
SLIRP-210ENST00000557431 ANO2Q9NQ90 1003 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 CLEC1BQ9P126 229 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 BRPF3Q9ULD4 1205 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 NOC2LQ9Y3T9 749 aaKnown RBP16.09■□□□□ 0.17
SLIRP-210ENST00000557431 PCDHA2Q9Y5H9 948 aa16.09■□□□□ 0.17
SLIRP-210ENST00000557431 PER2O15055 1255 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 CALM1P0DP23 149 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 CALM2P0DP24 149 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 CALM3P0DP25 149 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 KRT76Q01546 638 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 NHLH1Q02575 133 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 SPOUT1Q5T280 376 aaKnown RBP16.08■□□□□ 0.16
SLIRP-210ENST00000557431 FAM102BQ5T8I3 360 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.16
SLIRP-210ENST00000557431 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 P2RX5Q93086 422 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 MTA3Q9BTC8 594 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 PLVAPQ9BX97 442 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 LRFN2Q9ULH4 789 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 NFASCO94856 1347 aa16.08■□□□□ 0.16
SLIRP-210ENST00000557431 WDFY4Q6ZS81 3184 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 BACH1O14867 736 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 NCK2O43639 380 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 KLRC1P26715 233 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 MRE11P49959 708 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 PHOX2BQ99453 314 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 RIC8AQ9NPQ8 531 aa16.07■□□□□ 0.16
SLIRP-210ENST00000557431 SMIM35A0A1B0GVV1 85 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 SMCO2A6NFE2 343 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 TBKBP1A7MCY6 615 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 MAFGO15525 162 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 CDC27P30260 824 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 ZNF76P36508 570 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 ADCY7P51828 1080 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 FUT2Q10981 343 aa16.06■□□□□ 0.16
SLIRP-210ENST00000557431 RTN1Q16799 776 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms