RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 FAM49AQ9H0Q0 323 aaPredicted RBP14.47□□□□□ -0.09
PSEN1-221ENST00000557293 ERAP1Q9NZ08 941 aa14.47□□□□□ -0.09
PSEN1-221ENST00000557293 FAM186AA6NE01 2351 aa14.47□□□□□ -0.09
PSEN1-221ENST00000557293 RRN3P2A6NIE6 340 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 BRD1O95696 1058 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 ITGB5P18084 799 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 SARSP49591 514 aaKnown RBP14.46□□□□□ -0.09
PSEN1-221ENST00000557293 IGBP1P78318 339 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 TMEM62Q0P6H9 643 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 TROAPQ12815 778 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 FAM102BQ5T8I3 360 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 IER5Q5VY09 327 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 CWC27Q6UX04 472 aaKnown RBP14.46□□□□□ -0.09
PSEN1-221ENST00000557293 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
PSEN1-221ENST00000557293 TRAPPC12Q8WVT3 735 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 APOL5Q9BWW9 433 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 CELF4Q9BZC1 486 aaKnown RBP14.46□□□□□ -0.09
PSEN1-221ENST00000557293 IL25Q9H293 177 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 SMOC2Q9H3U7 446 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 SMARCAD1Q9H4L7 1026 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 CWH43Q9H720 699 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 CDHR5Q9HBB8 845 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 TRPV2Q9Y5S1 764 aa14.46□□□□□ -0.09
PSEN1-221ENST00000557293 KDM3AQ9Y4C1 1321 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 LOXHD1Q8IVV2 1947 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
PSEN1-221ENST00000557293 TECP42680 631 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 IMMTQ16891 758 aaKnown RBP14.45□□□□□ -0.1
PSEN1-221ENST00000557293 TMEM266Q2M3C6 531 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 FNDC1Q4ZHG4 1894 aaPredicted RBP14.45□□□□□ -0.1
PSEN1-221ENST00000557293 ERMP1Q7Z2K6 904 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 NLRX1Q86UT6 975 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 GPRASP2Q96D09 838 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 ERVK-5Q9HDB9 667 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 TYW1Q9NV66 732 aaKnown RBP14.45□□□□□ -0.1
PSEN1-221ENST00000557293 TMEM260Q9NX78 707 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 PCDHB12Q9Y5F1 795 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 PCDHA2Q9Y5H9 948 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 UBIAD1Q9Y5Z9 338 aa14.45□□□□□ -0.1
PSEN1-221ENST00000557293 HIDE1A8MVS5 230 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 C9IYK1 514 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 FAM189BP81408 668 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 PDE12Q6L8Q7 609 aaKnown RBP14.44□□□□□ -0.1
PSEN1-221ENST00000557293 PLEKHM2Q8IWE5 1019 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 GLG1Q92896 1179 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 SORCS3Q9UPU3 1222 aa14.44□□□□□ -0.1
PSEN1-221ENST00000557293 NOC2LQ9Y3T9 749 aaKnown RBP14.44□□□□□ -0.1
PSEN1-221ENST00000557293 TBKBP1A7MCY6 615 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 C2CD4DB7Z1M9 353 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 RPLP2P05387 115 aaKnown RBP14.43□□□□□ -0.1
PSEN1-221ENST00000557293 PLCB3Q01970 1234 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 PAK2Q13177 524 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
PSEN1-221ENST00000557293 PLCB4Q15147 1175 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 LRRC55Q6ZSA7 311 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 FRMD5Q7Z6J6 570 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 TMEM40Q8WWA1 233 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 LNPKQ9C0E8 428 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 OSBPL3Q9H4L5 887 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 POMKQ9H5K3 350 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 RGS18Q9NS28 235 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
PSEN1-221ENST00000557293 LRFN2Q9ULH4 789 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 LZTS1Q9Y250 596 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 PCDHB7Q9Y5E2 793 aa14.43□□□□□ -0.1
PSEN1-221ENST00000557293 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 HOXB8P17481 243 aaPredicted RBP14.42□□□□□ -0.1
PSEN1-221ENST00000557293 ID4P47928 161 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 PLPP4Q5VZY2 271 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 ASTLQ6HA08 431 aaPredicted RBP14.42□□□□□ -0.1
PSEN1-221ENST00000557293 LLGL2Q6P1M3 1020 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 UBALD2Q8IYN6 164 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 THNSL1Q8IYQ7 743 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 NME8Q8N427 588 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 MRPS27Q92552 414 aaKnown RBP14.42□□□□□ -0.1
PSEN1-221ENST00000557293 ADAM2Q99965 735 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 AAASQ9NRG9 546 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 PKD2L1Q9P0L9 805 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 TAF6LQ9Y6J9 622 aa14.42□□□□□ -0.1
PSEN1-221ENST00000557293 FSD2A1L4K1 749 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
PSEN1-221ENST00000557293 IBSPP21815 317 aaPredicted RBP14.41□□□□□ -0.1
PSEN1-221ENST00000557293 KRT76Q01546 638 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 NFX1Q12986 1120 aaKnown RBP14.41□□□□□ -0.1
PSEN1-221ENST00000557293 DSC3Q14574 896 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 SPOUT1Q5T280 376 aaKnown RBP14.41□□□□□ -0.1
PSEN1-221ENST00000557293 MTHFD1LQ6UB35 978 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 ZBTB33Q86T24 672 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 KIAA0319LQ8IZA0 1049 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 ADSSL1Q8N142 457 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 JADE2Q9NQC1 790 aa14.41□□□□□ -0.1
PSEN1-221ENST00000557293 DCHS1Q96JQ0 3298 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms