RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CRIM1Q9NZV1 1036 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 SAMD15Q9P1V8 674 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 TAGLN3Q9UI15 199 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 INTUQ9ULD6 942 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 ZNF652Q9Y2D9 606 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 USP42Q9H9J4 1324 aaKnown RBP7.2□□□□□ -1.26
FOXN3-215ENST00000557261 RTL9Q8NET4 1388 aa7.2□□□□□ -1.26
FOXN3-215ENST00000557261 FANCGO15287 622 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 F2P00734 622 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 SLFN14P0C7P3 912 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 MYBL2P10244 700 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 YY1P25490 414 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 SNW1Q13573 536 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 AUHQ13825 339 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 TTLL4Q14679 1199 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 SUZ12Q15022 739 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 EZH2Q15910 746 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 PARP10Q53GL7 1025 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 ANKRD45Q5TZF3 282 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 ZCCHC8Q6NZY4 707 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 C7orf61Q8IZ16 206 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 ARHGEF39Q8N4T4 335 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 OR2W6PQ8NHA6 318 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 ZNF507Q8TCN5 953 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 CYB5D2Q8WUJ1 264 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 SUCLG2Q96I99 432 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 GPR101Q96P66 508 aaPredicted RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 BICC1Q9H694 974 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 NOL6Q9H6R4 1146 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 ANLNQ9NQW6 1124 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 RAD18Q9NS91 495 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 WHRNQ9P202 907 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 STAP2Q9UGK3 403 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 DDX20Q9UHI6 824 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 PNMA2Q9UL42 364 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 MINPP1Q9UNW1 487 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 NSFL1CQ9UNZ2 370 aaKnown RBP7.19□□□□□ -1.26
FOXN3-215ENST00000557261 PCDHA8Q9Y5H6 950 aa7.19□□□□□ -1.26
FOXN3-215ENST00000557261 NRXN2Q9P2S2 1712 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 E2F8A0AVK6 867 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 WDR64B1ANS9 1081 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 SH3BP5O60239 455 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 EFCAB14O75071 495 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 RFPL1O75677 317 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 CAMTA2O94983 1202 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 CST3P01034 146 aaPredicted RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 SNRPB2P08579 225 aaKnown RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 RGS3P49796 1198 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 SCNN1BP51168 640 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 GALEQ14376 348 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 ODF1Q14990 250 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 GFOD2Q3B7J2 385 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 SLC35F1Q5T1Q4 408 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 UBE3BQ7Z3V4 1068 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 NLRP10Q86W26 655 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 ZNF34Q8IZ26 560 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 USP33Q8TEY7 942 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 ISL2Q96A47 359 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 VWCEQ96DN2 955 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 FUBP3Q96I24 572 aaKnown RBP eCLIP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 WNK4Q96J92 1243 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 PTPRHQ9HD43 1115 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 LUC7LQ9NQ29 371 aaKnown RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 AVENQ9NQS1 362 aaPredicted RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 SPTLC3Q9NUV7 552 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 GPR55Q9Y2T6 319 aaPredicted RBP7.18□□□□□ -1.26
FOXN3-215ENST00000557261 TTC41PQ6P2S7 1318 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 CNTNAP5Q8WYK1 1306 aa7.18□□□□□ -1.26
FOXN3-215ENST00000557261 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 ARNTLO00327 626 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 IFRD1O00458 451 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 LRRN2O75325 713 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 RPS6KA4O75676 772 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 CIAO1O76071 339 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 WISP1O95388 367 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 GRIK1P39086 918 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 RFX5P48382 616 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 IL2P60568 153 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 ERVK-21P61565 698 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 DPY19L1Q2PZI1 675 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 INAVAQ3KP66 663 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 ANKRD39Q53RE8 183 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 TTC22Q5TAA0 569 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 UBE2R2Q712K3 238 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 IGSF22Q8N9C0 903 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 LINC00116Q8NCU8 138 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 RNF214Q8ND24 703 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 SMC1BQ8NDV3 1235 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 KCTD13Q8WZ19 329 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 LRGUKQ96M69 825 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 KRTAP4-6Q9BYQ5 205 aa7.17□□□□□ -1.26
FOXN3-215ENST00000557261 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 H2AFY2Q9P0M6 372 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 CCNL1Q9UK58 526 aaPredicted RBP7.17□□□□□ -1.26
FOXN3-215ENST00000557261 AP4E1Q9UPM8 1137 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms