RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TRPV1Q8NER1 839 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 FAM200AQ8TCP9 573 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 KATNBL1Q9H079 304 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 RBSNQ9H1K0 784 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 ABHD16BQ9H3Z7 469 aa26.46■■□□□ 1.83
SIX4-203ENST00000556952 BMP2KQ9NSY1 1161 aaPredicted RBP26.46■■□□□ 1.83
SIX4-203ENST00000556952 WRAP73Q9P2S5 460 aaPredicted RBP26.46■■□□□ 1.83
SIX4-203ENST00000556952 MYH9P35579 1960 aaKnown RBP26.45■■□□□ 1.83
SIX4-203ENST00000556952 ATG7O95352 703 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 ARIH2O95376 493 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 GGPS1O95749 300 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 SNAI1O95863 264 aaPredicted RBP26.45■■□□□ 1.82
SIX4-203ENST00000556952 CCND3P30281 292 aaPredicted RBP26.45■■□□□ 1.82
SIX4-203ENST00000556952 SOX10P56693 466 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 ASIC1P78348 528 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 LY6KQ17RY6 165 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 ABHD15Q6UXT9 468 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 C4orf19Q8IY42 314 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 ATP6V0A1Q93050 837 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 RNF208Q9H0X6 261 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 BCAS3Q9H6U6 928 aa26.45■■□□□ 1.82
SIX4-203ENST00000556952 CAPN15O75808 1086 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 SSBP05455 408 aaKnown RBP eCLIP26.44■■□□□ 1.82
SIX4-203ENST00000556952 SUPT20HL2P0C7V6 817 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 PRAMEF19Q5SWL8 479 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 CELF3Q5SZQ8 465 aaKnown RBP26.44■■□□□ 1.82
SIX4-203ENST00000556952 TAPT1Q6NXT6 567 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 GPBP1Q86WP2 473 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 MLKLQ8NB16 471 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 DDX12PQ92771 950 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 GTPBP4Q9BZE4 634 aaKnown RBP26.44■■□□□ 1.82
SIX4-203ENST00000556952 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.44■■□□□ 1.82
SIX4-203ENST00000556952 BHMT2Q9H2M3 363 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 DACH1Q9UI36 760 aa26.44■■□□□ 1.82
SIX4-203ENST00000556952 ARID2Q68CP9 1835 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 A0A087WWV3 80 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 PVALEFA0A1B0GWK0 134 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 KLRC4O43908 158 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 TXNP10599 105 aaKnown RBP26.43■■□□□ 1.82
SIX4-203ENST00000556952 XRCC6P12956 609 aaKnown RBP eCLIP26.43■■□□□ 1.82
SIX4-203ENST00000556952 CYBAP13498 195 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 CYP11B2P19099 503 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 ZNF165P49910 485 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 MRE11P49959 708 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 ISM2Q6H9L7 571 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 C11orf57Q6ZUT1 292 aaPredicted RBP26.43■■□□□ 1.82
SIX4-203ENST00000556952 MLXIPQ9HAP2 919 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 GRPEL1Q9HAV7 217 aa26.43■■□□□ 1.82
SIX4-203ENST00000556952 RHOBTB3O94955 611 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 BMP6P22004 513 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 SP4Q02446 784 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 UNC13DQ70J99 1090 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 PIGOQ8TEQ8 1089 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 BPIFA3Q9BQP9 254 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 HMX1Q9NP08 348 aaPredicted RBP26.42■■□□□ 1.82
SIX4-203ENST00000556952 PAK6Q9NQU5 681 aaPredicted RBP26.42■■□□□ 1.82
SIX4-203ENST00000556952 PDGFCQ9NRA1 345 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 KCND2Q9NZV8 630 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 DBR1Q9UK59 544 aaKnown RBP26.42■■□□□ 1.82
SIX4-203ENST00000556952 IGSF9BQ9UPX0 1349 aa26.42■■□□□ 1.82
SIX4-203ENST00000556952 UGCGQ16739 394 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 KMT5BQ4FZB7 885 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 L1TD1Q5T7N2 865 aaKnown RBP26.41■■□□□ 1.82
SIX4-203ENST00000556952 RNF214Q8ND24 703 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 EXOC1Q9NV70 894 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 GABBR1Q9UBS5 961 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 ACVR2BQ13705 512 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 CT47A1Q5JQC4 288 aaPredicted RBP26.41■■□□□ 1.82
SIX4-203ENST00000556952 ZNF658Q5TYW1 1059 aaPredicted RBP26.41■■□□□ 1.82
SIX4-203ENST00000556952 DHX37Q8IY37 1157 aaKnown RBP26.41■■□□□ 1.82
SIX4-203ENST00000556952 DNAJC19Q96DA6 116 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 TMEM106CQ9BVX2 250 aa26.41■■□□□ 1.82
SIX4-203ENST00000556952 IGKV6D-21A0A0A0MT36 114 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 SORBS3O60504 671 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 YWHABP31946 246 aaKnown RBP26.4■■□□□ 1.82
SIX4-203ENST00000556952 SWSAP1Q6NVH7 229 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 DYMQ7RTS9 669 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 CCDC60Q8IWA6 550 aaPredicted RBP26.4■■□□□ 1.82
SIX4-203ENST00000556952 SEPT1Q8WYJ6 367 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 CBX8Q9HC52 389 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 ANKEF1Q9NU02 776 aa26.4■■□□□ 1.82
SIX4-203ENST00000556952 BACH1O14867 736 aa26.39■■□□□ 1.82
SIX4-203ENST00000556952 ARSHQ5FYA8 562 aa26.39■■□□□ 1.82
SIX4-203ENST00000556952 DEFB118Q96PH6 123 aa26.39■■□□□ 1.82
SIX4-203ENST00000556952 GSTTP1A0A1W2PQM5 241 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 ARHGEF35A5YM69 484 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 NOP56O00567 594 aaKnown RBP26.38■■□□□ 1.81
SIX4-203ENST00000556952 NKRFO15226 690 aaKnown RBP eCLIP26.38■■□□□ 1.81
SIX4-203ENST00000556952 KRT18P05783 430 aaKnown RBP26.38■■□□□ 1.81
SIX4-203ENST00000556952 GJB1P08034 283 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 LAMC2Q13753 1193 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 IQSEC1Q6DN90 963 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 RINT1Q6NUQ1 792 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 CCDC65Q8IXS2 484 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 EMID1Q96A84 441 aaPredicted RBP26.38■■□□□ 1.81
SIX4-203ENST00000556952 ZNF302Q9NR11 478 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 ZHX1Q9UKY1 873 aaPredicted RBP26.38■■□□□ 1.81
SIX4-203ENST00000556952 TELO2Q9Y4R8 837 aa26.38■■□□□ 1.81
SIX4-203ENST00000556952 MAFBQ9Y5Q3 323 aaPredicted RBP26.38■■□□□ 1.81
SIX4-203ENST00000556952 MKI67P46013 3256 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms