RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 MTMR6Q9Y217 621 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 HTTP42858 3142 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 MYH4Q9Y623 1939 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 SZT2Q5T011 3432 aa6.11□□□□□ -1.43
ATXN3-244ENST00000556898 STK36Q9NRP7 1315 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 A0A0G2JLL6 359 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CCDC196A0A1B0GTZ2 297 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 C19orf81C9J6K1 198 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 STXBP3O00186 592 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CXCL11O14625 94 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 WDR46O15213 610 aaKnown RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CDKL5O76039 1030 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 DEXIO95424 95 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 FLT3LGP49771 235 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 GNAQP50148 359 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 USP14P54578 494 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CDC37Q16543 378 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 PFKFB3Q16875 520 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 PRRT3Q5FWE3 981 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 GPATCH4Q5T3I0 446 aaKnown RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 KRT40Q6A162 431 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 Q7L0L9 218 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 HEATR3Q7Z4Q2 680 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 PRRT2Q7Z6L0 340 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 FERMT3Q86UX7 667 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 SCG3Q8WXD2 468 aaKnown RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 ATG4CQ96DT6 458 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 C12orf42Q96LP6 360 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 HINFPQ9BQA5 517 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 SPZ1Q9BXG8 430 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 RNF26Q9BY78 433 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 SH2D4AQ9H788 454 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 RAVER2Q9HCJ3 691 aaKnown RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 PAK6Q9NQU5 681 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 PRDM6Q9NQX0 595 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
ATXN3-244ENST00000556898 CXXC1Q9P0U4 656 aaPredicted RBP6.1□□□□□ -1.43
ATXN3-244ENST00000556898 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF536O15090 1300 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 SERTM1A2A2V5 107 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 STX6O43752 255 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 FLOT1O75955 427 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 BRD1O95696 1058 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 CYP2C8P10632 490 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 SCG2P13521 617 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 STAT2P52630 851 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 HMGN5P82970 282 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 AKAP17AQ02040 695 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 SPEM2Q0P670 501 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 PPP2R5BQ15173 497 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 NPY5RQ15761 445 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 USH1GQ495M9 461 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 EARS2Q5JPH6 523 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 CATSPERGQ6ZRH7 1159 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 FASTKD5Q7L8L6 764 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 CPXCR1Q8N123 301 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 REPS2Q8NFH8 660 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 RASGRP4Q8TDF6 673 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 TBC1D5Q92609 795 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 RRP36Q96EU6 259 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 PGBD1Q96JS3 809 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 HSH2DQ96JZ2 352 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 C8orf76Q96K31 380 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 SLF1Q9BQI6 1058 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 LZTS2Q9BRK4 669 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 RANBP17Q9H2T7 1088 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 CWC22Q9HCG8 908 aaKnown RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 TMEM260Q9NX78 707 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 CHMP5Q9NZZ3 219 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 FEM1BQ9UK73 627 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 PPP1R9AQ9ULJ8 1098 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-244ENST00000556898 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 ZNF232Q9UNY5 417 aa6.09□□□□□ -1.43
ATXN3-244ENST00000556898 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-244ENST00000556898 PNMA6FA0A0J9YX94 578 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 SPDYE3A6NKU9 549 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 BTBD18B2RXH4 712 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 H3BQV1 296 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 ZBTB5O15062 677 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 CNMDO75829 334 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 F13A1P00488 732 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 ZSCAN22P10073 491 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 ELNP15502 786 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 SMARCA1P28370 1054 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 ADH7P40394 386 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 NAPAP54920 295 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 NLRP5P59047 1200 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 RESTQ13127 1097 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms