RNA–Protein interactions for RNA: ENST00000556744.1

MARK3-211, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 1,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-211ENST00000556744 DOCK5Q9H7D0 1870 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 M0R2N6 131 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 SOX1O00570 391 aaPredicted RBP10.83□□□□□ -0.68
MARK3-211ENST00000556744 EDIL3O43854 480 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 DEXIO95424 95 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 CIITAP33076 1130 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 AK2P54819 239 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 FPGSQ05932 587 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 SCRN1Q12765 414 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 SHHQ15465 462 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 NPY5RQ15761 445 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 CEP55Q53EZ4 464 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 C9orf50Q5SZB4 431 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 CYP2W1Q8TAV3 490 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 ZNF516Q92618 1163 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 KIF2CQ99661 725 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 KATNAL1Q9BW62 490 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 SLC26A6Q9BXS9 759 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 WNT8AQ9H1J5 351 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 HIPK3Q9H422 1215 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 KCNH7Q9NS40 1196 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 TMEM260Q9NX78 707 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 GTF2IRD1Q9UHL9 959 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 NFASCO94856 1347 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 STK36Q9NRP7 1315 aa10.83□□□□□ -0.68
MARK3-211ENST00000556744 IGLV3-22A0A075B6J6 115 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 GSTTP1A0A1W2PQM5 241 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 H3BRB1 525 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 CTDNEP1O95476 244 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 CYP2C18P33260 490 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 MCCD1P59942 119 aaPredicted RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 ARHGAP4P98171 946 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 AKAP17AQ02040 695 aaKnown RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 PPIGQ13427 754 aaKnown RBP eCLIP10.82□□□□□ -0.682e-14■□□□□ 10.5
MARK3-211ENST00000556744 MTMR1Q13613 665 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 TMEM240Q5SV17 173 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 GALNT17Q6IS24 598 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 GDF6Q6KF10 455 aaPredicted RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 CPLX2Q6PUV4 134 aaKnown RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 TRIM22Q8IYM9 498 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 REXO1Q8N1G1 1221 aaKnown RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 TMEM199Q8N511 208 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 DAGLBQ8NCG7 672 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 PBXIP1Q96AQ6 731 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 TUT1Q9H6E5 874 aaKnown RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 HDAC6Q9UBN7 1215 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 TELO2Q9Y4R8 837 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 TRIP12Q14669 1992 aaPredicted RBP10.82□□□□□ -0.68
MARK3-211ENST00000556744 UMODL1Q5DID0 1318 aa10.82□□□□□ -0.68
MARK3-211ENST00000556744 FAM86B1E9PN63 330 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 CPLX1O14810 134 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 DHX15O43143 795 aaKnown RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 LGR5O75473 907 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 CDKL5O76039 1030 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 ATG7O95352 703 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 LGALS2P05162 132 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 FAM86B2P0C5J1 330 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 ZNF286BP0CG31 522 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 ARP10275 920 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 CYP2C9P11712 490 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 CSF2RAP15509 400 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 RBM25P49756 843 aaKnown RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 ADAM17P78536 824 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 PTGISQ16647 500 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 TRIM71Q2Q1W2 868 aaKnown RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 JAKMIP3Q5VZ66 844 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 FAM109BQ6ICB4 259 aaPredicted RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 SEPT1Q8WYJ6 367 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 PGBD1Q96JS3 809 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 SLKQ9H2G2 1235 aaPredicted RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 AGO4Q9HCK5 861 aaKnown RBP10.81□□□□□ -0.68
MARK3-211ENST00000556744 IL23AQ9NPF7 189 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 VPS54Q9P1Q0 977 aa10.81□□□□□ -0.68
MARK3-211ENST00000556744 IGKV6D-21A0A0A0MT36 114 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 FDPSP14324 419 aaKnown RBP10.8□□□□□ -0.68
MARK3-211ENST00000556744 RFC2P35250 354 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 USP11P51784 963 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 NEK4P51957 841 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 SMAD3P84022 425 aaKnown RBP10.8□□□□□ -0.68
MARK3-211ENST00000556744 PTK7Q13308 1070 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 ITGB3BPQ13352 177 aaPredicted RBP10.8□□□□□ -0.68
MARK3-211ENST00000556744 GPNMBQ14956 572 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 ME3Q16798 604 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 FAM47CQ5HY64 1035 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 SERINC5Q86VE9 423 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 C7orf31Q8N865 590 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 TET1Q8NFU7 2136 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 DHX38Q92620 1227 aaKnown RBP10.8□□□□□ -0.68
MARK3-211ENST00000556744 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 LENG9Q96B70 501 aa10.8□□□□□ -0.68
MARK3-211ENST00000556744 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.8□□□□□ -0.68
MARK3-211ENST00000556744 PCDHA4Q9UN74 947 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms