RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 SH3PXD2AQ5TCZ1 1133 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 CCDC62Q6P9F0 684 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 TMC7Q7Z402 723 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 RTN4RL1Q86UN2 441 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-242ENST00000556644 NPAS4Q8IUM7 802 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 LCORLQ8N3X6 602 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 AUTS2Q8WXX7 1259 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 MRPS27Q92552 414 aaKnown RBP5.05□□□□□ -1.6
ATXN3-242ENST00000556644 MARVELD3Q96A59 401 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 GPR20Q99678 358 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 ANTXR1Q9H6X2 564 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-242ENST00000556644 DOPEY1Q5JWR5 2465 aa5.05□□□□□ -1.6
ATXN3-242ENST00000556644 TEX15Q9BXT5 2789 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 C2orf71A6NGG8 1288 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 AXIN1O15169 862 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 MYBP10242 640 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 BMP3P12645 472 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 TARSP26639 723 aaKnown RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 CD52P31358 61 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 STAT2P52630 851 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 STARD6P59095 220 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 ADCY1Q08828 1119 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 MTAPQ13126 283 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 NONOQ15233 471 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 SLFN13Q68D06 897 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 RNF43Q68DV7 783 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 TCEAL6Q6IPX3 200 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 PDE12Q6L8Q7 609 aaKnown RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 C16orf86Q6ZW13 317 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 CABP7Q86V35 215 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 CERS3Q8IU89 383 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 WWC1Q8IX03 1113 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 FAM160A2Q8N612 972 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 BBXQ8WY36 941 aaPredicted RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 TCEAL3Q969E4 200 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 BORCS6Q96GS4 357 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 MYADMQ96S97 322 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 ARRDC1-AS1Q9H2J1 176 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 ARMT1Q9H993 441 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 TYW1Q9NV66 732 aaKnown RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 SETD4Q9NVD3 440 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 DZANK1Q9NVP4 752 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 LRFN2Q9ULH4 789 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 MTMR7Q9Y216 660 aa5.04□□□□□ -1.6
ATXN3-242ENST00000556644 SPTAN1Q13813 2472 aaKnown RBP5.04□□□□□ -1.6
ATXN3-242ENST00000556644 ZBED9Q6R2W3 1325 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 CHURC1-FNTBB4DL54 471 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SRGAP3O43295 1099 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 HRO43593 1189 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 STAG3L1P0CL83 205 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 TDGF1P13385 188 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SCG2P13521 617 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 EDNRBP24530 442 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 PDE4AP27815 886 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 FNTBP49356 437 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 GPC5P78333 572 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 ATP8B2P98198 1209 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SMC1AQ14683 1233 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 MLF2Q15773 248 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 LETM2Q2VYF4 491 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SLFNL1Q499Z3 407 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 CCDC158Q5M9N0 1113 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 HEATR6Q6AI08 1181 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 KCTD1Q719H9 257 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 GPR149Q86SP6 731 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 TMEFF1Q8IYR6 380 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SHDQ96IW2 340 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 RPP25Q9BUL9 199 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 RNPEPQ9H4A4 650 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 CLMPQ9H6B4 373 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 EHMT1Q9H9B1 1298 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 LTB4R2Q9NPC1 389 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 NGRNQ9NPE2 291 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 PPP4R2Q9NY27 417 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 KCNK4Q9NYG8 393 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 TLR7Q9NYK1 1049 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 NYAP2Q9P242 653 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 PUF60Q9UHX1 559 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 DDX41Q9UJV9 622 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 RAXQ9Y2V3 346 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 SALL2Q9Y467 1007 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 NEUROG3Q9Y4Z2 214 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 NUMBLQ9Y6R0 609 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 BAZ2AQ9UIF9 1905 aaKnown RBP5.03□□□□□ -1.6
ATXN3-242ENST00000556644 CFAP46Q8IYW2 2715 aa5.03□□□□□ -1.6
ATXN3-242ENST00000556644 APC2O95996 2303 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 C2orf16Q68DN1 1984 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 GREB1LQ9C091 1923 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-242ENST00000556644 C4orf47A7E2U8 309 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 CAND2O75155 1236 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 FGFR1P11362 822 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 PDE6AP16499 860 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 RASA1P20936 1047 aa5.02□□□□□ -1.61
ATXN3-242ENST00000556644 MCCP23508 829 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms