RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 GPR162Q16538 588 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 GPIHBP1Q8IV16 184 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 KCTD17Q8N5Z5 321 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 NSUN6Q8TEA1 469 aaKnown RBP20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 SMCR8Q8TEV9 937 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 ZSWIM4Q9H7M6 989 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 PARVGQ9HBI0 331 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 FAM207AQ9NSI2 230 aaPredicted RBP20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 BTBD7Q9P203 1132 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 PAXBP1Q9Y5B6 917 aa20.22■□□□□ 0.83
SDR39U1-220ENST00000556548 ATP2A1O14983 1001 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 NR2F2P24468 414 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 SP4Q02446 784 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 ACRBPQ8NEB7 543 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 OR8K1Q8NGG5 319 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 KIF18AQ8NI77 898 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 MMRN2Q9H8L6 949 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 CLIC2O15247 247 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 QARSP47897 775 aaKnown RBP20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 ERGIC2Q96RQ1 377 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 TTYH3Q9C0H2 523 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 DNAI1Q9UI46 699 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 TELO2Q9Y4R8 837 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 ADGRG1Q9Y653 693 aa20.21■□□□□ 0.83
SDR39U1-220ENST00000556548 EPHB6O15197 1021 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 RGS20O76081 388 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 MUTP22033 750 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 CNTN2Q02246 1040 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 DMTNQ08495 405 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 PADI6Q6TGC4 694 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 CYP26C1Q6V0L0 522 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 TMTC1Q8IUR5 882 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 CEP63Q96MT8 703 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 PAGR1Q9BTK6 254 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 LZTFL1Q9NQ48 299 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 ZHX1Q9UKY1 873 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 HIP1RO75146 1068 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 CCDC175P0C221 793 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 GAP43P17677 238 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 NF2P35240 595 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 FSTL1Q12841 308 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 ODR4Q5SWX8 454 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 TRIM65Q6PJ69 517 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 USP50Q70EL3 339 aaPredicted RBP20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 NLRX1Q86UT6 975 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 ANKRD35Q8N283 1001 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
SDR39U1-220ENST00000556548 CETN3O15182 167 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 FOXR2Q6PJQ5 311 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 ANKRD13AQ8IZ07 590 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 OLFML3Q9NRN5 406 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 SIK3Q9Y2K2 1263 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 WDR90Q96KV7 1748 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 KIF2AO00139 706 aaPredicted RBP20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 FECHP22830 423 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 TSR1Q2NL82 804 aaKnown RBP20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 WDR59Q6PJI9 974 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 LBX2Q6XYB7 198 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 FAM178BQ8IXR5 827 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 DNAJC7Q99615 494 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 NUP58Q9BVL2 599 aa20.19■□□□□ 0.82
SDR39U1-220ENST00000556548 USO1O60763 962 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 ETF1P62495 437 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 IRX3P78415 501 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 PPATQ06203 517 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 EDRF1Q3B7T1 1238 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 PLA2G4FQ68DD2 849 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 ERO1BQ86YB8 467 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 DAW1Q8N136 415 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 L3MBTL3Q96JM7 780 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 IRX2Q9BZI1 471 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 R3HDMLQ9H3Y0 253 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 TRAF3IP3Q9Y228 551 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 OTOFQ9HC10 1997 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 ASTN1O14525 1302 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 MYPNQ86TC9 1320 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 WDR64B1ANS9 1081 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 FANCGO15287 622 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 CALUO43852 315 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 RARRES1P49788 294 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 NCAPG2Q86XI2 1143 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 CCDC43Q96MW1 224 aaKnown RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 INPP4AQ96PE3 977 aaPredicted RBP20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 FIZ1Q96SL8 496 aa20.18■□□□□ 0.82
SDR39U1-220ENST00000556548 A0A0G2JLL6 359 aaPredicted RBP20.17■□□□□ 0.82
SDR39U1-220ENST00000556548 PDXKO00764 312 aa20.17■□□□□ 0.82
SDR39U1-220ENST00000556548 NPEPPSP55786 919 aa20.17■□□□□ 0.82
SDR39U1-220ENST00000556548 PRRT2Q7Z6L0 340 aaPredicted RBP20.17■□□□□ 0.82
SDR39U1-220ENST00000556548 TYW1Q9NV66 732 aaKnown RBP20.17■□□□□ 0.82
SDR39U1-220ENST00000556548 BACH1O14867 736 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 TGFB1I1O43294 461 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 GNA14O95837 355 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 NR3C1P04150 777 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 CASP4P49662 377 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 GNG11P61952 73 aa20.16■□□□□ 0.82
SDR39U1-220ENST00000556548 KRT76Q01546 638 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms