RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 FSD2A1L4K1 749 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 LINC01565O15544 149 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 PPFIA3O75145 1194 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 TBX10O75333 385 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 SRGAP2BP0DMP2 458 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 GTF2F1P35269 517 aaKnown RBP eCLIP11.18□□□□□ -0.62
CRX-203ENST00000556527 LIFRP42702 1097 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 NRIP1P48552 1158 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 MRE11P49959 708 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 SLC26A2P50443 739 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 ACTR2P61160 394 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 DLX2Q07687 328 aaPredicted RBP11.18□□□□□ -0.62
CRX-203ENST00000556527 FAM160B1Q5W0V3 765 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 RBM23Q86U06 439 aaKnown RBP11.18□□□□□ -0.62
CRX-203ENST00000556527 RAB11FIP4Q86YS3 637 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 RNF135Q8IUD6 432 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 FANCBQ8NB91 859 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 KLHL23Q8NBE8 558 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 MXRA8Q9BRK3 442 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 CELF4Q9BZC1 486 aaKnown RBP11.18□□□□□ -0.62
CRX-203ENST00000556527 TLE6Q9H808 572 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 RC3H2Q9HBD1 1191 aaKnown RBP11.18□□□□□ -0.62
CRX-203ENST00000556527 PCDHA2Q9Y5H9 948 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 NLRC5Q86WI3 1866 aa11.18□□□□□ -0.62
CRX-203ENST00000556527 BAZ2BQ9UIF8 2168 aaKnown RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 IGSF9BQ9UPX0 1349 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 ITGB1P05556 798 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 ADCY7P51828 1080 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 NHLH1Q02575 133 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 ADAM15Q13444 863 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 HERC4Q5GLZ8 1057 aaPredicted RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 RNF20Q5VTR2 975 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 FAM43BQ6ZT52 329 aaPredicted RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 HFE2Q6ZVN8 426 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 TMTC3Q6ZXV5 915 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 SUGP1Q8IWZ8 645 aaKnown RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 CKAP2LQ8IYA6 745 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 EFHBQ8N7U6 833 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 POF1BQ8WVV4 589 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 FBXL18Q96ME1 805 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
CRX-203ENST00000556527 MUC6Q6W4X9 2439 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 DOCK5Q9H7D0 1870 aa11.17□□□□□ -0.62
CRX-203ENST00000556527 NFASCO94856 1347 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
CRX-203ENST00000556527 PKN1Q16512 942 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 TMEM266Q2M3C6 531 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 CEP55Q53EZ4 464 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 SPPL3Q8TCT6 385 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 LINC01599Q8WXQ3 324 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 EDAQ92838 391 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 LRRC2Q9BYS8 371 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 ANO2Q9NQ90 1003 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 C1orf112Q9NSG2 853 aa11.16□□□□□ -0.62
CRX-203ENST00000556527 NAP1L2Q9ULW6 460 aaPredicted RBP11.16□□□□□ -0.62
CRX-203ENST00000556527 KAT6AQ92794 2004 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 TBKBP1A7MCY6 615 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 DDX39AO00148 427 aaKnown RBP11.15□□□□□ -0.62
CRX-203ENST00000556527 SLC27A2O14975 620 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 GPR182O15218 404 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 HBP1O60381 514 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 DNAJB1P25685 340 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 KLRC1P26715 233 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 FGD1P98174 961 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 UBE3AQ05086 875 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 CREB3L3Q68CJ9 461 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 WWC2Q6AWC2 1192 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 PDXDC2PQ6P474 469 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 SLC24A5Q71RS6 500 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 ADGRD2Q7Z7M1 963 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 RTN4RL1Q86UN2 441 aaPredicted RBP11.15□□□□□ -0.62
CRX-203ENST00000556527 SMRP1Q8NCR6 262 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 PBXIP1Q96AQ6 731 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 PCYT2Q99447 389 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 ADAM2Q99965 735 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 ANO3Q9BYT9 981 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 AGO4Q9HCK5 861 aaKnown RBP11.15□□□□□ -0.62
CRX-203ENST00000556527 RIC8AQ9NPQ8 531 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 TLR9Q9NR96 1032 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
CRX-203ENST00000556527 BARX2Q9UMQ3 279 aaPredicted RBP11.15□□□□□ -0.62
CRX-203ENST00000556527 PIEZO1Q92508 2521 aa11.15□□□□□ -0.62
CRX-203ENST00000556527 KDM3AQ9Y4C1 1321 aa11.14□□□□□ -0.63
CRX-203ENST00000556527 SMCO2A6NFE2 343 aa11.14□□□□□ -0.63
CRX-203ENST00000556527 hCG_1984214I3L0E3 225 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms