RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 DUSP8Q13202 625 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 TBR1Q16650 682 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 FOXB2Q5VYV0 432 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 IGFL4Q6B9Z1 124 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 PTRH1Q86Y79 214 aaKnown RBP5.91□□□□□ -1.46
SCFD1-219ENST00000556413 EXTL1Q92935 676 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 ZNF428Q96B54 188 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 ZDHHC5Q9C0B5 715 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 CBLCQ9ULV8 474 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 NR2E1Q9Y466 385 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 SLC30A1Q9Y6M5 507 aa5.91□□□□□ -1.46
SCFD1-219ENST00000556413 ARVCFO00192 962 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 PDPK1O15530 556 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 C4BPAP04003 597 aaKnown RBP5.9□□□□□ -1.46
SCFD1-219ENST00000556413 ADCY8P40145 1251 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 JAM2P57087 298 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 GUCY1A3Q02108 690 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 NFYCQ13952 458 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 FIGNQ5HY92 759 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 FAM209AQ5JX71 171 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 LARP4Q71RC2 724 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCFD1-219ENST00000556413 C16orf59Q7L2K0 433 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 CXXC5Q7LFL8 322 aaKnown RBP5.9□□□□□ -1.46
SCFD1-219ENST00000556413 POLNQ7Z5Q5 900 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 OR14A2Q96R54 314 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 CDC6Q99741 560 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 INCENPQ9NQS7 918 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 GALNT8Q9NY28 637 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 BTBD7Q9P203 1132 aa5.9□□□□□ -1.46
SCFD1-219ENST00000556413 PRAMEF25A6NGN4 478 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 ZNF561-AS1K7EIQ3 104 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 HMGCRP04035 888 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 AOAHP28039 575 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 MC4RP32245 332 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 KCNQ1P51787 676 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 SUMO1P63165 101 aaKnown RBP5.89□□□□□ -1.47
SCFD1-219ENST00000556413 STILQ15468 1287 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 CRY1Q16526 586 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 CRB2Q5IJ48 1285 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 MAMDC4Q6UXC1 1216 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 ZBTB38Q8NAP3 1195 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-219ENST00000556413 CFHR4Q92496 578 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 WNK4Q96J92 1243 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 PLA2G12BQ9BX93 195 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 C12orf65Q9H3J6 166 aaKnown RBP5.89□□□□□ -1.47
SCFD1-219ENST00000556413 PFDN2Q9UHV9 154 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 FBXO10Q9UK96 956 aa5.89□□□□□ -1.47
SCFD1-219ENST00000556413 KCNK3O14649 394 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 ARHGAP6O43182 974 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 MPIG6BO95866 241 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 HERVK_113P62684 666 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 ST5P78524 1137 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 FHL2Q14192 279 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 EIF4HQ15056 248 aaKnown RBP5.88□□□□□ -1.47
SCFD1-219ENST00000556413 MTERF2Q49AM1 385 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 EP400NLQ6ZTU2 488 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 BTBD2Q9BX70 525 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 SMURF1Q9HCE7 757 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 PCDHA9Q9Y5H5 950 aa5.88□□□□□ -1.47
SCFD1-219ENST00000556413 CCDC66A2RUB6 948 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 NARSO43776 548 aaKnown RBP5.87□□□□□ -1.47
SCFD1-219ENST00000556413 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
SCFD1-219ENST00000556413 DGCR2P98153 550 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 PTH1RQ03431 593 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 SSRP1Q08945 709 aaKnown RBP5.87□□□□□ -1.47
SCFD1-219ENST00000556413 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 SEC23AQ15436 765 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 TRIM68Q6AZZ1 485 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 USP30Q70CQ3 517 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 CKAP2LQ8IYA6 745 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 FAM89AQ96GI7 184 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 EXOC2Q96KP1 924 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 AMNQ9BXJ7 453 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 CSRNP2Q9H175 543 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 PUF60Q9UHX1 559 aaKnown RBP5.87□□□□□ -1.47
SCFD1-219ENST00000556413 CDC42EP3Q9UKI2 254 aa5.87□□□□□ -1.47
SCFD1-219ENST00000556413 U2SURPO15042 1029 aaKnown RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 GSTA4O15217 222 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 DIAPH1O60610 1272 aaKnown RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 STK10O94804 968 aaKnown RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 ZNF202O95125 648 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 NAT1P18440 290 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 RPS19P39019 145 aaKnown RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 DNM2P50570 870 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 GABREP78334 506 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 LACTBP83111 547 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 CD83Q01151 205 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 FOXL1Q12952 345 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 PCOLCEQ15113 449 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 FAM47CQ5HY64 1035 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 KANK2Q63ZY3 851 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 LRSAM1Q6UWE0 723 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 OTOP2Q7RTS6 562 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 C1orf210Q8IVY1 113 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 IL17DQ8TAD2 202 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 IPO9Q96P70 1041 aaKnown RBP5.86□□□□□ -1.47
SCFD1-219ENST00000556413 CCDC113Q9H0I3 377 aa5.86□□□□□ -1.47
SCFD1-219ENST00000556413 UCKL1Q9NWZ5 548 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms