RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 DNAJB2P25686 324 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 FAM26DQ5JW98 314 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 SWSAP1Q6NVH7 229 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 Q7L0L9 218 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 RSPH3Q86UC2 560 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 KCNMB3Q9NPA1 279 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 GABBR1Q9UBS5 961 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
SLIRP-206ENST00000556375 TBX3O15119 743 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 CHMP2AO43633 222 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 CCNT1O60563 726 aaKnown RBP13.01□□□□□ -0.33
SLIRP-206ENST00000556375 EFCAB14O75071 495 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
SLIRP-206ENST00000556375 ATP4AP20648 1035 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 MCM2P49736 904 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 SAFBQ15424 915 aaKnown RBP eCLIP13.01□□□□□ -0.33
SLIRP-206ENST00000556375 RAB30Q15771 203 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 ZNF484Q5JVG2 852 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 CKAP2LQ8IYA6 745 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 FAM184AQ8NB25 1140 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 TRAPPC12Q8WVT3 735 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-206ENST00000556375 GJA10Q969M2 543 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 FAM167AQ96KS9 214 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 SLC9A7Q96T83 725 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 PCDHA2Q9Y5H9 948 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 CDH23Q9H251 3354 aa13.01□□□□□ -0.33
SLIRP-206ENST00000556375 SMIM35A0A1B0GVV1 85 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 GRXCR1A8MXD5 290 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 CD2BP2O95400 341 aaKnown RBP13□□□□□ -0.33
SLIRP-206ENST00000556375 KCNJ6P48051 423 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 WDR5P61964 334 aaKnown RBP13□□□□□ -0.33
SLIRP-206ENST00000556375 MGAT3Q09327 533 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 PPP2R5CQ13362 524 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 MIER3Q7Z3K6 550 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 POTEDQ86YR6 584 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 PHOSPHO2Q8TCD6 241 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 DNAJB3Q8WWF6 145 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 TIFAQ96CG3 184 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 TMX3Q96JJ7 454 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 MTMR10Q9NXD2 777 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 VAV3Q9UKW4 847 aa13□□□□□ -0.33
SLIRP-206ENST00000556375 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 ZBTB42B2RXF5 422 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 ZNF862O60290 1169 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 OATP04181 439 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 PBX2P40425 430 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 MRPS6P82932 125 aaKnown RBP12.99□□□□□ -0.33
SLIRP-206ENST00000556375 GUCY1B3Q02153 619 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 PRKCEQ02156 737 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 UGCGQ16739 394 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 MTHFD1LQ6UB35 978 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 HAS1Q92839 578 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 FAM49AQ9H0Q0 323 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-206ENST00000556375 TTYH1Q9H313 450 aaPredicted RBP12.99□□□□□ -0.33
SLIRP-206ENST00000556375 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 PCDHA11Q9Y5I1 949 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 ARID2Q68CP9 1835 aa12.99□□□□□ -0.33
SLIRP-206ENST00000556375 C22orf31O95567 290 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 CHRNA1P02708 482 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 KLRC1P26715 233 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-206ENST00000556375 IKBKEQ14164 716 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 IER5Q5VY09 327 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 HERC6Q8IVU3 1022 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 SLFN12Q8IYM2 578 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 DBF4BQ8NFT6 615 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 SEPT8Q92599 483 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 APBB2Q92870 758 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 FOXP1Q9H334 677 aaPredicted RBP12.98□□□□□ -0.33
SLIRP-206ENST00000556375 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 TRPV2Q9Y5S1 764 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 CDY2AQ9Y6F7 541 aa12.98□□□□□ -0.33
SLIRP-206ENST00000556375 KDM3AQ9Y4C1 1321 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 M0QZ92 97 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 MARCH6O60337 910 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 NEMFO60524 1076 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
SLIRP-206ENST00000556375 GHRP10912 638 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 RABGGTBP53611 331 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 DEFB103AP81534 67 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 FBXO47Q5MNV8 452 aa12.97□□□□□ -0.33
SLIRP-206ENST00000556375 TSHZ1Q6ZSZ6 1077 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms