RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PRRX2Q99811 253 aa5.72□□□□□ -1.49
SCFD1-218ENST00000556256 EPN3Q9H201 632 aa5.72□□□□□ -1.49
SCFD1-218ENST00000556256 MSL2Q9HCI7 577 aa5.72□□□□□ -1.49
SCFD1-218ENST00000556256 TCRBV5S4A2TA0A5A2 114 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 AGRPO00253 132 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 SOD2P04179 222 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 ADCY8P40145 1251 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 COL10A1Q03692 680 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 GRM7Q14831 915 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 BTBD8Q5XKL5 378 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 TMPRSS6Q8IU80 811 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 VOPP1Q96AW1 172 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 TTPALQ9BTX7 342 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 NELFAQ9H3P2 528 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 GIT1Q9Y2X7 761 aa5.71□□□□□ -1.5
SCFD1-218ENST00000556256 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 GJB6O95452 261 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 GPR85P60893 370 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 IL13RA1P78552 427 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 EIF4HQ15056 248 aaKnown RBP5.7□□□□□ -1.5
SCFD1-218ENST00000556256 NTRK3Q16288 839 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 SPTY2D1Q68D10 685 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-218ENST00000556256 CXXC5Q7LFL8 322 aaKnown RBP5.7□□□□□ -1.5
SCFD1-218ENST00000556256 ADGRE4PQ86SQ3 457 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 SCUBE1Q8IWY4 988 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 THEMISQ8N1K5 641 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-218ENST00000556256 D2HGDHQ8N465 521 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 ZFYVE21Q9BQ24 234 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 PARPBPQ9NWS1 579 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 CDC42EP3Q9UKI2 254 aa5.7□□□□□ -1.5
SCFD1-218ENST00000556256 FAM47E-STBD1D6RA91 191 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 FOXN1O15353 648 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 PTPN1P18031 435 aaKnown RBP5.69□□□□□ -1.5
SCFD1-218ENST00000556256 PCOLCEQ15113 449 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 TRIM68Q6AZZ1 485 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 IFNL3Q8IZI9 196 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 TMEM176AQ96HP8 235 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 TGIF2Q9GZN2 237 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 IPPKQ9H8X2 491 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 AGO3Q9H9G7 860 aaKnown RBP5.69□□□□□ -1.5
SCFD1-218ENST00000556256 RIC8BQ9NVN3 520 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 PRKAG3Q9UGI9 489 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 FBXO10Q9UK96 956 aa5.69□□□□□ -1.5
SCFD1-218ENST00000556256 CAPN14A8MX76 684 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 BMP5P22003 454 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 ETFBP38117 255 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 MRE11P49959 708 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-218ENST00000556256 RRP1BQ14684 758 aaKnown RBP5.68□□□□□ -1.5
SCFD1-218ENST00000556256 STILQ15468 1287 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 FILIP1Q7Z7B0 1213 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.68□□□□□ -1.52e-17■■■■□ 19.6
SCFD1-218ENST00000556256 OR10A2Q9H208 303 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 GALNT8Q9NY28 637 aa5.68□□□□□ -1.5
SCFD1-218ENST00000556256 BLACEA4D250 179 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 PRODHO43272 600 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 PEX11BO96011 259 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 SSBP05455 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
SCFD1-218ENST00000556256 PTGS1P23219 599 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 LMO1P25800 156 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 GJA4P35212 333 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 SLC25A3Q00325 362 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 HGFACQ04756 655 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 LAIR1Q6GTX8 287 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 STYK1Q6J9G0 422 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 RPUSD2Q8IZ73 545 aaKnown RBP5.67□□□□□ -1.5
SCFD1-218ENST00000556256 NLGN4XQ8N0W4 816 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 OR14K1Q8NGZ2 314 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 WNK4Q96J92 1243 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 INCENPQ9NQS7 918 aa5.67□□□□□ -1.5
SCFD1-218ENST00000556256 IL12RB1P42701 662 aa5.66□□□□□ -1.5
SCFD1-218ENST00000556256 ARHGAP36Q6ZRI8 547 aa5.66□□□□□ -1.5
SCFD1-218ENST00000556256 SRPK3Q9UPE1 567 aa5.66□□□□□ -1.5
SCFD1-218ENST00000556256 CYP27B1O15528 508 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 SLC26A4O43511 780 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 FGFR1P11362 822 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 PABPC1P11940 636 aaKnown RBP5.65□□□□□ -1.5
SCFD1-218ENST00000556256 MEOX1P50221 254 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 CRHR2Q13324 411 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 OTOP2Q7RTS6 562 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 SHCBP1Q8NEM2 672 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 ALG1Q9BT22 464 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 GPRC5BQ9NZH0 403 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 BTBD7Q9P203 1132 aa5.65□□□□□ -1.5
SCFD1-218ENST00000556256 ASXL2Q76L83 1435 aa5.65□□□□□ -1.51
SCFD1-218ENST00000556256 A0A0G2JNJ9 132 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 PMS2P1A4D2B8 440 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 TMEM191CA6NGB0 347 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 CD83Q01151 205 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 FSTL1Q12841 308 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 NSMFQ6X4W1 530 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 RTKN2Q8IZC4 609 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 SGSM3Q96HU1 749 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 AARSD1Q9BTE6 412 aaKnown RBP5.64□□□□□ -1.51
SCFD1-218ENST00000556256 BTBD2Q9BX70 525 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 CCSER2Q9H7U1 834 aa5.64□□□□□ -1.51
SCFD1-218ENST00000556256 ARHGEF4Q9NR80 690 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms