RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 AGPAT5Q9NUQ2 364 aa11.14□□□□□ -0.63
EFCAB11-209ENST00000556005 TYW1Q9NV66 732 aaKnown RBP11.14□□□□□ -0.63
EFCAB11-209ENST00000556005 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.14□□□□□ -0.63
EFCAB11-209ENST00000556005 SNCAIPQ9Y6H5 919 aa11.14□□□□□ -0.63
EFCAB11-209ENST00000556005 SBF1O95248 1867 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 RASSF10A6NK89 507 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 PRPF6O94906 941 aaKnown RBP11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 KLK7P49862 253 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 JAK3P52333 1124 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 ZNF131P52739 623 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 KRT76Q01546 638 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 PLS1Q14651 629 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 MEA1Q16626 185 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 MMRN2Q9H8L6 949 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 DBR1Q9UK59 544 aaKnown RBP11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 SIK3Q9Y2K2 1263 aa11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 EPN1Q9Y6I3 576 aaPredicted RBP11.13□□□□□ -0.63
EFCAB11-209ENST00000556005 STAM2O75886 525 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 LYPLA2O95372 231 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CASQ1P31415 396 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 NF2P35240 595 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 GNG11P61952 73 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CDK17Q00537 523 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 FRMD5Q7Z6J6 570 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 TRIM59Q8IWR1 403 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 FAM178BQ8IXR5 827 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PURBQ96QR8 312 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CHP1Q99653 195 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 EDEM3Q9BZQ6 932 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CYP39A1Q9NYL5 469 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PHIPQ8WWQ0 1821 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 WDR64B1ANS9 1081 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ADM5C9JUS6 153 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 KIF5CO60282 957 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ATP9AO75110 1047 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 NDUFA10O95299 355 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ERCC3P19447 782 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 HOXD13P35453 343 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PSMC5P62195 406 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PPP2R3AQ06190 1150 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 C1QBPQ07021 282 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ARHGAP29Q52LW3 1261 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ODR4Q5SWX8 454 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 WDR59Q6PJI9 974 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 C4orf19Q8IY42 314 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CCDC170Q8IYT3 715 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CHST13Q8NET6 341 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 ZC3H15Q8WU90 426 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 CDHR1Q96JP9 859 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 METTL14Q9HCE5 456 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 POLD4Q9HCU8 107 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 LZTFL1Q9NQ48 299 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 A1CFQ9NQ94 594 aaKnown RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 UBE4BO95155 1302 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 PARP14Q460N5 1801 aa11.12□□□□□ -0.63
EFCAB11-209ENST00000556005 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 IPO7O95373 1038 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 SLU7O95391 586 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 YBX3P16989 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 HNRNPH3P31942 346 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 CYLC1P35663 651 aaPredicted RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 KRT83P78385 493 aa11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 PPATQ06203 517 aa11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 INPP4AQ96PE3 977 aaPredicted RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 TIPINQ9BVW5 301 aa11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 RLFQ13129 1914 aa11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 POLR2AP24928 1970 aaKnown RBP11.11□□□□□ -0.63
EFCAB11-209ENST00000556005 SLC16A3O15427 465 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 HIP1RO75146 1068 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 NR3C1P04150 777 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 EPB41P11171 864 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 RARRES1P49788 294 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 NFIL3Q16649 462 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 ZNF746Q6NUN9 644 aaPredicted RBP11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 CACNA2D4Q7Z3S7 1137 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 ANKRD13AQ8IZ07 590 aa11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 PROCA1Q8NCQ7 364 aaPredicted RBP11.1□□□□□ -0.63
EFCAB11-209ENST00000556005 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms