RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
LRP1-209ENST00000555941 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
LRP1-209ENST00000555941 CELF4Q9BZC1 486 aaKnown RBP13.1□□□□□ -0.31
LRP1-209ENST00000555941 ZMYND12Q9H0C1 365 aa13.1□□□□□ -0.31
LRP1-209ENST00000555941 FAM49AQ9H0Q0 323 aaPredicted RBP13.1□□□□□ -0.31
LRP1-209ENST00000555941 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
LRP1-209ENST00000555941 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
LRP1-209ENST00000555941 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
LRP1-209ENST00000555941 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
LRP1-209ENST00000555941 COL1A2P08123 1366 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 STAG3L1P0CL83 205 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 GNA11P29992 359 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 CDC27P30260 824 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 CTNNB1P35222 781 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 ADD1P35611 737 aaKnown RBP13.09□□□□□ -0.31
LRP1-209ENST00000555941 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
LRP1-209ENST00000555941 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
LRP1-209ENST00000555941 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 ZNF484Q5JVG2 852 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 ODR4Q5SWX8 454 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 PLA2G4DQ86XP0 818 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 NPAS4Q8IUM7 802 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 CMTR2Q8IYT2 770 aaKnown RBP13.09□□□□□ -0.31
LRP1-209ENST00000555941 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.09□□□□□ -0.31
LRP1-209ENST00000555941 NEK9Q8TD19 979 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 PGBD1Q96JS3 809 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
LRP1-209ENST00000555941 TBC1D22BQ9NU19 505 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 TMEM260Q9NX78 707 aa13.09□□□□□ -0.31
LRP1-209ENST00000555941 NID2Q14112 1375 aa13.08□□□□□ -0.31
LRP1-209ENST00000555941 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 FAM86B1E9PN63 330 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 BACH1O14867 736 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 PRPF3O43395 683 aaKnown RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 CCNE2O96020 404 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 FAM86B2P0C5J1 330 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 LINC00271P0C7V0 271 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 KLRC1P26715 233 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 CD52P31358 61 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 HSPA4P34932 840 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 KRT76Q01546 638 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 PAK2Q13177 524 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 TCEAL5Q5H9L2 206 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 BLOC1S2Q6QNY1 142 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 FAM178BQ8IXR5 827 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 REXO1Q8N1G1 1221 aaKnown RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 P2RX5Q93086 422 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 PADI3Q9ULW8 664 aa13.08□□□□□ -0.32
LRP1-209ENST00000555941 ARIH1Q9Y4X5 557 aaPredicted RBP13.08□□□□□ -0.32
LRP1-209ENST00000555941 IGLV3-22A0A075B6J6 115 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 PI4K2BG5E9Z4 385 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 PSMA5P28066 241 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 AKAP17AQ02040 695 aaKnown RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 Q6ZUG5 572 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 RTN4RL1Q86UN2 441 aaPredicted RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 GJD3Q8N144 294 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 TRAPPC12Q8WVT3 735 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
LRP1-209ENST00000555941 ZNF577Q9BSK1 485 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 EPHX3Q9H6B9 360 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 ZNF302Q9NR11 478 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 TCEAL9Q9UHQ7 104 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 LOXHD1Q8IVV2 1947 aa13.07□□□□□ -0.32
LRP1-209ENST00000555941 RBAK-RBAKDNI3L0D1 243 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
LRP1-209ENST00000555941 GPR37L1O60883 481 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 REC8O95072 547 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 MMP1P03956 469 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 CIITAP33076 1130 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 APOBRQ0VD83 1088 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 PKN1Q16512 942 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 CTC1Q2NKJ3 1217 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 TMEM31Q5JXX7 168 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 SKAP1Q86WV1 359 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 LINC01599Q8WXQ3 324 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
LRP1-209ENST00000555941 BRF1Q92994 677 aa13.06□□□□□ -0.32
LRP1-209ENST00000555941 PPP2R3CQ969Q6 453 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms