RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 RNF20Q5VTR2 975 aa13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 KCNB2Q92953 911 aa13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 FAM49AQ9H0Q0 323 aaPredicted RBP13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 SQORQ9Y6N5 450 aa13.96□□□□□ -0.17
MTHFD1-207ENST00000554677 ADGRA3Q8IWK6 1321 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 POTEB3A0JP26 581 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 H3BQ06 376 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 CCNE2O96020 404 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 ADD1P35611 737 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 ADCY7P51828 1080 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 TMEM62Q0P6H9 643 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 CAMK1Q14012 370 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 PTCRAQ6ISU1 281 aaPredicted RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 POTEBQ6S5H4 581 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 ABHD15Q6UXT9 468 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 PABPC5Q96DU9 382 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
MTHFD1-207ENST00000554677 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 KLF18A0A0U1RQI7 1052 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 SMIM35A0A1B0GVV1 85 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 FAM86B1E9PN63 330 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 GPR37L1O60883 481 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 FAM86B2P0C5J1 330 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 CPA1P15085 419 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 ATP4AP20648 1035 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 CTNNB1P35222 781 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 IER5Q5VY09 327 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 MTHFD1LQ6UB35 978 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 NIPA1Q7RTP0 329 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 GJD3Q8N144 294 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 CELF4Q9BZC1 486 aaKnown RBP13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 CDHR5Q9HBB8 845 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 PADI3Q9ULW8 664 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 MUC6Q6W4X9 2439 aa13.94□□□□□ -0.18
MTHFD1-207ENST00000554677 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 PLXNA4Q9HCM2 1894 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 IGLV3-22A0A075B6J6 115 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 GOLGA8AA7E2F4 631 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 EDIL3O43854 480 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 RPLP2P05387 115 aaKnown RBP13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 CYP3A4P08684 503 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 KLRC1P26715 233 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 RCAN1P53805 252 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 HYAL1Q12794 435 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 BTG3Q14201 252 aaPredicted RBP13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 PKN1Q16512 942 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 PFKFB3Q16875 520 aaPredicted RBP13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 CENPQQ7L2Z9 268 aaPredicted RBP13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 NME8Q8N427 588 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 PLAGL2Q9UPG8 496 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 MRPL42Q9Y6G3 142 aaKnown RBP13.93□□□□□ -0.18
MTHFD1-207ENST00000554677 DDX39AO00148 427 aaKnown RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 HBP1O60381 514 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 MGEA5O60502 916 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 DNAJB1P25685 340 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 GTF2F1P35269 517 aaKnown RBP eCLIP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 DLX2Q07687 328 aaPredicted RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 KRT32Q14532 448 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 PUS10Q3MIT2 529 aaKnown RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 TMEM31Q5JXX7 168 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 PLA2G4DQ86XP0 818 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 CCDC60Q8IWA6 550 aaPredicted RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 PLVAPQ9BX97 442 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 FTHL17Q9BXU8 183 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 ZMYND12Q9H0C1 365 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 RWDD3Q9Y3V2 267 aa13.92□□□□□ -0.18
MTHFD1-207ENST00000554677 FAM86C2PA6NEL3 165 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 CDC45O75419 566 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 SCG2P13521 617 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 PLA2G5P39877 138 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 GATMP50440 423 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 SLC26A2P50443 739 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 KRT76Q01546 638 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 NPAS4Q8IUM7 802 aa13.91□□□□□ -0.18
MTHFD1-207ENST00000554677 CMTR2Q8IYT2 770 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms