RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 HEATR3Q7Z4Q2 680 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 CCDC82Q8N4S0 544 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 FANCBQ8NB91 859 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 SPPL3Q8TCT6 385 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 MFSD14AQ96MC6 490 aa27.68■■■□□ 2.02
FOXA1-204ENST00000554607 YTHDC1Q96MU7 727 aaKnown RBP27.68■■■□□ 2.02
FOXA1-204ENST00000554607 NFASCO94856 1347 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 IGSF9BQ9UPX0 1349 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 hCG_1642624A0A1W2PR95 340 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 LINC01565O15544 149 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 ITGB1P05556 798 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 SCG2P13521 617 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 PLCB4Q15147 1175 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 TMTC3Q6ZXV5 915 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 KLHL23Q8NBE8 558 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 ZBTB10Q96DT7 871 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 RNF216Q9NWF9 866 aaPredicted RBP27.67■■■□□ 2.02
FOXA1-204ENST00000554607 LRFN2Q9ULH4 789 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 KDM3AQ9Y4C1 1321 aa27.67■■■□□ 2.02
FOXA1-204ENST00000554607 SMIM35A0A1B0GVV1 85 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 EYA4O95677 639 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 SLC26A2P50443 739 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 ACTR2P61160 394 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 TMEM62Q0P6H9 643 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 RNF135Q8IUD6 432 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 EFHBQ8N7U6 833 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 MUTYHQ9UIF7 546 aa27.66■■■□□ 2.02
FOXA1-204ENST00000554607 FOSP01100 380 aaPredicted RBP27.65■■■□□ 2.02
FOXA1-204ENST00000554607 DNAJB1P25685 340 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 KRT76Q01546 638 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 PAN2Q504Q3 1202 aaKnown RBP27.65■■■□□ 2.02
FOXA1-204ENST00000554607 SYNE3Q6ZMZ3 975 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 HFE2Q6ZVN8 426 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 POF1BQ8WVV4 589 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 MSLNLQ96KJ4 702 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 FBXL18Q96ME1 805 aa27.65■■■□□ 2.02
FOXA1-204ENST00000554607 NHLH1Q02575 133 aa27.64■■■□□ 2.02
FOXA1-204ENST00000554607 C5orf42Q9H799 3197 aa27.64■■■□□ 2.01
FOXA1-204ENST00000554607 SLC27A2O14975 620 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 COASYQ13057 564 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 CEP55Q53EZ4 464 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 ODR4Q5SWX8 454 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 MTHFD1LQ6UB35 978 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 SGMS1Q86VZ5 419 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 RAB11FIP4Q86YS3 637 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 CYP2W1Q8TAV3 490 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 TRAPPC12Q8WVT3 735 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 LSG1Q9H089 658 aaKnown RBP27.63■■■□□ 2.01
FOXA1-204ENST00000554607 RIC8AQ9NPQ8 531 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 PCDHB7Q9Y5E2 793 aa27.63■■■□□ 2.01
FOXA1-204ENST00000554607 ATG7O95352 703 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 SARSP49591 514 aaKnown RBP27.62■■■□□ 2.01
FOXA1-204ENST00000554607 MRE11P49959 708 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 NFX1Q12986 1120 aaKnown RBP27.62■■■□□ 2.01
FOXA1-204ENST00000554607 PPP1R18Q6NYC8 613 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 ADGRD2Q7Z7M1 963 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 MICU3Q86XE3 530 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 EDAQ92838 391 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 AGO4Q9HCK5 861 aaKnown RBP27.62■■■□□ 2.01
FOXA1-204ENST00000554607 AAASQ9NRG9 546 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 CLEC1BQ9P126 229 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 PCDHB12Q9Y5F1 795 aa27.62■■■□□ 2.01
FOXA1-204ENST00000554607 ARP10275 920 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 NRIP1P48552 1158 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 NAPAP54920 295 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 UBE3AQ05086 875 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 CREB3L3Q68CJ9 461 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 SMRP1Q8NCR6 262 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 TMX1Q9H3N1 280 aa27.61■■■□□ 2.01
FOXA1-204ENST00000554607 RBM28Q9NW13 759 aaKnown RBP27.61■■■□□ 2.01
FOXA1-204ENST00000554607 HBP1O60381 514 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 KLRC1P26715 233 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 FAM160B1Q5W0V3 765 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 WWC2Q6AWC2 1192 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 LRRC2Q9BYS8 371 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 GLT8D2Q9H1C3 349 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 C1orf112Q9NSG2 853 aa27.6■■■□□ 2.01
FOXA1-204ENST00000554607 LOXHD1Q8IVV2 1947 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 IGKV6D-21A0A0A0MT36 114 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 FSD2A1L4K1 749 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 MEIS1O00470 390 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 RPS6KA5O75582 802 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 ADCY7P51828 1080 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 ITGB3BPQ13352 177 aaPredicted RBP27.59■■■□□ 2.01
FOXA1-204ENST00000554607 NECTIN1Q15223 517 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 TMEM266Q2M3C6 531 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 SPOUT1Q5T280 376 aaKnown RBP27.59■■■□□ 2.01
FOXA1-204ENST00000554607 BMP8AQ7Z5Y6 402 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 RBM23Q86U06 439 aaKnown RBP27.59■■■□□ 2.01
FOXA1-204ENST00000554607 MICAL1Q8TDZ2 1067 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 ANO3Q9BYT9 981 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 TLE6Q9H808 572 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 ERVK-5Q9HDB9 667 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 KIAA1671Q9BY89 1806 aa27.59■■■□□ 2.01
FOXA1-204ENST00000554607 hCG_1984214I3L0E3 225 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 BACH1O14867 736 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 ZNF76P36508 570 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 GATMP50440 423 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 PKN1Q16512 942 aa27.58■■■□□ 2.01
FOXA1-204ENST00000554607 NIPA1Q7RTP0 329 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms