RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 F8W031 263 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-228ENST00000554592 ATE1O95260 518 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 CBX7O95931 251 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 CETPP11597 493 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 KIR3DL1P43629 444 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 RBM5P52756 815 aaKnown RBP eCLIP6.17□□□□□ -1.42
ATXN3-228ENST00000554592 FBXW10Q5XX13 1052 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 UBE2Q1Q7Z7E8 422 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 LRRN4CLQ8ND94 238 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 FAM13CQ8NE31 585 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 MPHOSPH8Q99549 860 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 SRRDQ9UH36 339 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
ATXN3-228ENST00000554592 KIAA0100Q14667 2235 aaKnown RBP6.17□□□□□ -1.42
ATXN3-228ENST00000554592 LRRC37AA6NMS7 1700 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 CCL5P13501 91 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 IL1R1P14778 569 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 JUNBP17275 347 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-228ENST00000554592 CYP7A1P22680 504 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 KLRK1P26718 216 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 PSMC4P43686 418 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 GIPRP48546 466 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 UBXN2AP68543 259 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 CDKAL1Q5VV42 579 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 C17orf99Q6UX52 265 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 C15orf52Q6ZUT6 534 aaKnown RBP6.16□□□□□ -1.42
ATXN3-228ENST00000554592 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ERO1BQ86YB8 467 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 FAM169BQ8N8A8 192 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 PI4K2BQ8TCG2 481 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 RAET1EQ8TD07 263 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 VWCEQ96DN2 955 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 LNPKQ9C0E8 428 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ANTXR1Q9H6X2 564 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ATP13A1Q9HD20 1204 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 LMCD1Q9NZU5 365 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF70Q9UC06 446 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-228ENST00000554592 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 MKI67P46013 3256 aaKnown RBP6.16□□□□□ -1.42
ATXN3-228ENST00000554592 KDM3BQ7LBC6 1761 aa6.16□□□□□ -1.42
ATXN3-228ENST00000554592 COL4A1P02462 1669 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 BTBD19C9JJ37 291 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 H3BS24 57 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 ELL2O00472 640 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 SGPL1O95470 568 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 IGKV5-2P06315 115 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 ETV3P41162 512 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 YARSP54577 528 aaKnown RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 ZP2Q05996 745 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 CHRNDQ07001 517 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 NEXNQ0ZGT2 675 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 IKZF1Q13422 519 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 VGLL4Q14135 290 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 KSR2Q6VAB6 950 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 ZNF804AQ7Z570 1209 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 THAP5Q7Z6K1 395 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 ATG4DQ86TL0 474 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 RBBP8NLQ8NC74 664 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 PIWIL2Q8TC59 973 aaKnown RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 U2AF1L4Q8WU68 220 aaKnown RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 RUNDC1Q96C34 613 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 TEPSINQ96N21 525 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 DUSP15Q9H1R2 295 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
ATXN3-228ENST00000554592 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 STXBP5LQ9Y2K9 1186 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
ATXN3-228ENST00000554592 SCN9AQ15858 1988 aa6.15□□□□□ -1.43
ATXN3-228ENST00000554592 SSC5DA1L4H1 1573 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 PI4KAP2A4QPH2 592 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 SLC22A31A6NKX4 558 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 WASH4PA8MWX3 477 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 SMAD7O15105 426 aaKnown RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 KLF4O43474 513 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 TAF5LO75529 589 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 CSF1RP07333 972 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 ZNF853P0CG23 659 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 SRFP11831 508 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 IMPDH2P12268 514 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 BMP8BP34820 402 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 PPIL2Q13356 520 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 CCDC30Q5VVM6 783 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 ANKS3Q6ZW76 656 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 LSRQ86X29 649 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 DEFB123Q8N688 67 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 PI4KAP1Q8N8J0 262 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 BAHD1Q8TBE0 780 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-228ENST00000554592 UBE2FQ969M7 185 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 HOOK2Q96ED9 719 aa6.14□□□□□ -1.43
ATXN3-228ENST00000554592 CRBNQ96SW2 442 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms