RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 AGPSO00116 658 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SNAP23O00161 211 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CYP27B1O15528 508 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 DNAJC6O75061 913 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RPS6KA5O75582 802 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PRDM1O75626 825 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CLSTN1O94985 981 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MMP1P03956 469 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 ATP1A1P05023 1023 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 IBSPP21815 317 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 COL8A1P27658 744 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CCT5P48643 541 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 AMPD2Q01433 879 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PPARDQ03181 441 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SSRP1Q08945 709 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 DOC2BQ14184 412 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KRT31Q15323 416 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PLEKHG6Q3KR16 790 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RRP12Q5JTH9 1297 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SPATA1Q5VX52 437 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 FBXW10Q5XX13 1052 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 GOLGA6L1Q8N7Z2 621 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KCNH5Q8NCM2 988 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SPATA20Q8TB22 786 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 AFAP1L1Q8TED9 768 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PAGE5Q96GU1 130 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 NUP88Q99567 741 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KAT14Q9H8E8 782 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PIH1D3Q9NQM4 214 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 ABHD10Q9NUJ1 306 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CWC25Q9NXE8 425 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 TAB2Q9NYJ8 693 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 HPCAL4Q9UM19 191 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KCNH4Q9UQ05 1017 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 LEMD3Q9Y2U8 911 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SUGT1Q9Y2Z0 365 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PRKAB1Q9Y478 270 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 DUSP10Q9Y6W6 482 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MYH13Q9UKX3 1938 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 USP54Q70EL1 1684 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PDE2AO00408 941 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 EXOC5O00471 708 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 GNB5O14775 395 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 IFIT3O14879 490 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 N4BP3O15049 544 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PRKAB2O43741 272 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MYO1BO43795 1136 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CDKL5O76039 1030 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RARAP10276 462 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 GUCY2CP25092 1073 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KRT9P35527 623 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PPARAQ07869 468 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 C2orf54Q08AI8 447 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RASGRF1Q13972 1273 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 GAS6Q14393 721 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 EZH2Q15910 746 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 KCTD19Q17RG1 926 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CCDC57Q2TAC2 916 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CDKAL1Q5VV42 579 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 ADAMTSL4Q6UY14 1074 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 HDAC7Q8WUI4 952 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 NUP133Q8WUM0 1156 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 PPM1EQ8WY54 764 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RAPGEF4Q8WZA2 1011 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 DDX17Q92841 729 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 NXPE3Q969Y0 559 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 RRP36Q96EU6 259 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 FAM89AQ96GI7 184 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CEP44Q9C0F1 390 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 EPB41L4AQ9HCS5 686 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 GPR108Q9NPR9 543 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SMARCAL1Q9NZC9 954 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 VPS54Q9P1Q0 977 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 DYRK1BQ9Y463 629 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SAMM50Q9Y512 469 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SRPRBQ9Y5M8 271 aaKnown RBP2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SLC12A7Q9Y666 1083 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MYH7P12883 1935 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 CDHR2Q9BYE9 1310 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 ZNF532Q9HCE3 1301 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 LAMB4A4D0S4 1761 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 OVOS2A0A0G2JMS6 1433 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MEGF6O75095 1541 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 AKAP11Q9UKA4 1901 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 MYH10P35580 1976 aa2.86□□□□□ -1.95
PRPF39-207ENST00000554439 SRCAPQ6ZRS2 3230 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 A0A096LPE4 126 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 A0A1W2PPZ6 126 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TTC26A0AVF1 554 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TRIM49BA6NDI0 452 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PES1O00541 588 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ADAMTS3O15072 1205 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 TLR3O15455 904 aaKnown RBP2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PDPK1O15530 556 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 DYRK3O43781 588 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 PPFIA4O75335 1185 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 CILPO75339 1184 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 F11P03951 625 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 FAM157BP0CG42 384 aa2.85□□□□□ -1.95
PRPF39-207ENST00000554439 ADD2P35612 726 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms