RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 IL2P60568 153 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 CATSPEREQ5SY80 951 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 ADGRG2Q8IZP9 1017 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 SMC1BQ8NDV3 1235 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 ASB15Q8WXK1 588 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 ERCC4Q92889 916 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-211ENST00000554437 WRNIP1Q96S55 665 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 H2AFY2Q9P0M6 372 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-211ENST00000554437 NTMQ9P121 344 aa7.15□□□□□ -1.26
SCFD1-211ENST00000554437 A0A1B0GTL3 188 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 RASSF10A6NK89 507 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 CYP7B1O75881 506 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 FBXO21O94952 628 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 PTGS1P23219 599 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 MC4RP32245 332 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 KPNA1P52294 538 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-211ENST00000554437 DLX2Q07687 328 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-211ENST00000554437 STRN3Q13033 797 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 RTP5Q14D33 572 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 DHCR24Q15392 516 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 PRAMEF18Q5VWM3 479 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 CREB3L3Q68CJ9 461 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 KRT26Q7Z3Y9 468 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 FAM177A1Q8N128 213 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-211ENST00000554437 LINC01356Q8N9X3 169 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 USP7Q93009 1102 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 ELF4Q99607 663 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-211ENST00000554437 UCKL1Q9NWZ5 548 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 BTBD7Q9P203 1132 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 ZFP69BQ9UJL9 534 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 SPO11Q9Y5K1 396 aa7.14□□□□□ -1.27
SCFD1-211ENST00000554437 PRAMEF22A3QJZ6 481 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 SH3D21A4FU49 640 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 FKBP9O95302 570 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 CYP17A1P05093 508 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 VIL1P09327 827 aaKnown RBP7.13□□□□□ -1.27
SCFD1-211ENST00000554437 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
SCFD1-211ENST00000554437 CANXP27824 592 aaKnown RBP7.13□□□□□ -1.27
SCFD1-211ENST00000554437 SARSP49591 514 aaKnown RBP7.13□□□□□ -1.27
SCFD1-211ENST00000554437 OCRLQ01968 901 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 FKBP9P1Q75LS8 142 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 C1QL4Q86Z23 238 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 PASD1Q8IV76 773 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 STPG3Q8N7X2 389 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 INCENPQ9NQS7 918 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 TOMM22Q9NS69 142 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 GALNT8Q9NY28 637 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 ASB1Q9Y576 335 aa7.13□□□□□ -1.27
SCFD1-211ENST00000554437 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 DDX3XO00571 662 aaKnown RBP eCLIP7.12□□□□□ -1.27
SCFD1-211ENST00000554437 PTX3P26022 381 aaPredicted RBP7.12□□□□□ -1.27
SCFD1-211ENST00000554437 IL13P35225 146 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 ADCYAP1R1P41586 468 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 LSSP48449 732 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 FNTBP49356 437 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 TRMT10BQ6PF06 316 aaKnown RBP7.12□□□□□ -1.27
SCFD1-211ENST00000554437 STRA8Q7Z7C7 330 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 C11orf74Q86VG3 221 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 EFHBQ8N7U6 833 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 WDR48Q8TAF3 677 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 TACO1Q9BSH4 297 aaKnown RBP7.12□□□□□ -1.27
SCFD1-211ENST00000554437 SPTLC3Q9NUV7 552 aa7.12□□□□□ -1.27
SCFD1-211ENST00000554437 KRTAP9-7A8MTY7 169 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 IL18BPO95998 194 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 ZSCAN22P10073 491 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-211ENST00000554437 MLLT6P55198 1093 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-211ENST00000554437 NFKB2Q00653 900 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 SMAD2Q15796 467 aaKnown RBP7.11□□□□□ -1.27
SCFD1-211ENST00000554437 FBLN7Q53RD9 439 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 CARFQ8N187 725 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-211ENST00000554437 TTC1Q99614 292 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 IFT22Q9H7X7 185 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 L2HGDHQ9H9P8 463 aa7.11□□□□□ -1.27
SCFD1-211ENST00000554437 NEMP1O14524 444 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 MPIG6BO95866 241 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 CPEP16870 476 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 BPIP17213 487 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 DPP8Q6V1X1 898 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-211ENST00000554437 AFAP1L2Q8N4X5 818 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 E2F7Q96AV8 911 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 SCYL1Q96KG9 808 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 AMNQ9BXJ7 453 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 KCND1Q9NSA2 647 aa7.1□□□□□ -1.27
SCFD1-211ENST00000554437 TGM5O43548 720 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ZEB2O60315 1214 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ZNF28P17035 718 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ECE1P42892 770 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ID4P47928 161 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 EPHA7Q15375 998 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 LRSAM1Q6UWE0 723 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-211ENST00000554437 NME9Q86XW9 330 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 CALML6Q8TD86 181 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 ZCCHC14Q8WYQ9 949 aaKnown RBP7.09□□□□□ -1.27
SCFD1-211ENST00000554437 FOXRED1Q96CU9 486 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-211ENST00000554437 C16orf92Q96LL3 132 aa7.09□□□□□ -1.27
SCFD1-211ENST00000554437 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms