RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 DDX20Q9UHI6 824 aaKnown RBP7.14□□□□□ -1.27
ATXN3-226ENST00000554350 CYP8B1Q9UNU6 501 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 AGTPBP1Q9UPW5 1226 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 CTNND2Q9UQB3 1225 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 SAMM50Q9Y512 469 aa7.14□□□□□ -1.27
ATXN3-226ENST00000554350 MYBBP1AQ9BQG0 1328 aaKnown RBP7.13□□□□□ -1.27
ATXN3-226ENST00000554350 GIPC1O14908 333 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 PLIN1O60240 522 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 LRIG2O94898 1065 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 CLTBP09497 229 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 ALADP13716 330 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 ITGB8P26012 769 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 RGS2P41220 211 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 GCLCP48506 637 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-226ENST00000554350 CDK8P49336 464 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 CLCN7P51798 805 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 LRRC14Q15048 493 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 RAB30Q15771 203 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 NKG7Q16617 165 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 TREML2Q5T2D2 321 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 MFSD14CQ5VZR4 134 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 ALG1LQ6GMV1 187 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-226ENST00000554350 FAM83AQ86UY5 434 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 CILP2Q8IUL8 1156 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 LPAR1Q92633 364 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 TEKT1Q969V4 418 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 YTHDC1Q96MU7 727 aaKnown RBP7.13□□□□□ -1.27
ATXN3-226ENST00000554350 C12orf49Q9H741 205 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 CD320Q9NPF0 282 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 COG5Q9UP83 839 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 MAPK8IP1Q9UQF2 711 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 TACC3Q9Y6A5 838 aa7.13□□□□□ -1.27
ATXN3-226ENST00000554350 DLG5Q8TDM6 1919 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 DBX1A6NMT0 343 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 MSCO60682 206 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 USP17L7P0C7H9 530 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 CAP2P40123 477 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 ADCYAP1R1P41586 468 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 TLE2Q04725 743 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 CHAF1AQ13111 956 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-226ENST00000554350 KRT24Q2M2I5 525 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 FYB2Q5VWT5 728 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 CCDC174Q6PII3 467 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 C22orf34Q6ZV56 151 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 ZSWIM9Q86XI8 627 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 SCYL3Q8IZE3 742 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 KCT2Q8NC54 265 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 ARRDC4Q8NCT1 418 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 ANKS1AQ92625 1134 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 PLPPR2Q96GM1 343 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 APBA2Q99767 749 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.12□□□□□ -1.27
ATXN3-226ENST00000554350 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 HYPKQ9NX55 129 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 DBF4Q9UBU7 674 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-226ENST00000554350 ZNF112Q9UJU3 913 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 AFG3L2Q9Y4W6 797 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 DNAH12Q6ZR08 3092 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 FRMPD3Q5JV73 1810 aa7.12□□□□□ -1.27
ATXN3-226ENST00000554350 PQBP1O60828 265 aaKnown RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 FRAT2O75474 233 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 P4HBP07237 508 aaKnown RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 HSPA5P11021 654 aaKnown RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 PABPC4Q13310 644 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 NFE2L2Q16236 605 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 SPOCD1Q6ZMY3 1216 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 CCDC84Q86UT8 332 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 RIN3Q8TB24 985 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 ZNF507Q8TCN5 953 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 ELMO3Q96BJ8 720 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 HSPA12BQ96MM6 686 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 LAS1LQ9Y4W2 734 aaKnown RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 LRRFIP2Q9Y608 721 aaKnown RBP7.11□□□□□ -1.27
ATXN3-226ENST00000554350 SPTBN4Q9H254 2564 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 PLXNB2O15031 1838 aa7.11□□□□□ -1.27
ATXN3-226ENST00000554350 RLFQ13129 1914 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 PRAMEF27A3QJZ7 478 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 PEX10O60683 326 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 ZNF865P0CJ78 1059 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 IRX3P78415 501 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 WDR78Q5VTH9 848 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 C15orf52Q6ZUT6 534 aaKnown RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 ZSCAN29Q8IWY8 852 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 FAM151AQ8WW52 585 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 FOXQ1Q9C009 403 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 WNT10AQ9GZT5 417 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 ASCC2Q9H1I8 757 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 FAM86C1Q9NVL1 165 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 LMCD1Q9NZU5 365 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-226ENST00000554350 FAM8A1Q9UBU6 413 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
ATXN3-226ENST00000554350 PRRC2BQ5JSZ5 2229 aaKnown RBP7.09□□□□□ -1.27
ATXN3-226ENST00000554350 MAPK8IP3Q9UPT6 1336 aa7.09□□□□□ -1.27
ATXN3-226ENST00000554350 PTPRZ1P23471 2315 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-226ENST00000554350 RFXAPO00287 272 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms