RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 C1QTNF1Q9BXJ1 281 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 CELF4Q9BZC1 486 aaKnown RBP21.34■■□□□ 1.01
CPSF2-203ENST00000554290 AGO3Q9H9G7 860 aaKnown RBP21.34■■□□□ 1.01
CPSF2-203ENST00000554290 BDP1A6H8Y1 2624 aa21.34■■□□□ 1.01
CPSF2-203ENST00000554290 FAM86B1E9PN63 330 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 DDX39AO00148 427 aaKnown RBP21.33■■□□□ 1.01
CPSF2-203ENST00000554290 IPO5O00410 1097 aaKnown RBP21.33■■□□□ 1.01
CPSF2-203ENST00000554290 PRPF3O43395 683 aaKnown RBP21.33■■□□□ 1.01
CPSF2-203ENST00000554290 HBP1O60381 514 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 REC8O95072 547 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 CCNE2O96020 404 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 FAM86B2P0C5J1 330 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 KCNA5P22460 613 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 PSMA5P28066 241 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 GNA11P29992 359 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 BMPR1AP36894 532 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 TMEM62Q0P6H9 643 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 LEXMQ3ZCV2 418 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 MIS18BP1Q6P0N0 1132 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 MTHFD1LQ6UB35 978 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 ABHD15Q6UXT9 468 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 REXO1Q8N1G1 1221 aaKnown RBP21.33■■□□□ 1.01
CPSF2-203ENST00000554290 FBXL16Q8N461 479 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 C11orf84Q9BUA3 381 aaPredicted RBP21.33■■□□□ 1.01
CPSF2-203ENST00000554290 TBC1D22BQ9NU19 505 aa21.33■■□□□ 1.01
CPSF2-203ENST00000554290 C5orf67F2Z3F1 127 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 COL9A1P20849 921 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 RPS6KB1P23443 525 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 KLRC1P26715 233 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 KRT76Q01546 638 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 BTG3Q14201 252 aaPredicted RBP21.32■■□□□ 1
CPSF2-203ENST00000554290 FAM43BQ6ZT52 329 aaPredicted RBP21.32■■□□□ 1
CPSF2-203ENST00000554290 BICD2Q8TD16 824 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 ATP8B4Q8TF62 1192 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 CRYGNQ8WXF5 182 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 ZNF577Q9BSK1 485 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 ZNF302Q9NR11 478 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 TCEAL9Q9UHQ7 104 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 PADI3Q9ULW8 664 aa21.32■■□□□ 1
CPSF2-203ENST00000554290 IGSF9BQ9UPX0 1349 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 KDM3AQ9Y4C1 1321 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 IGLV3-22A0A075B6J6 115 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 DHX15O43143 795 aaKnown RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 DGKIO75912 1065 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 STAG3L1P0CL83 205 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 SETQ01105 290 aaPredicted RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 PAK2Q13177 524 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 PKN1Q16512 942 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 SWSAP1Q6NVH7 229 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 PDXDC2PQ6P474 469 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 CLP1Q92989 425 aaKnown RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 ZNF689Q96CS4 500 aaPredicted RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 AGXT2Q9BYV1 514 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 LMAN2LQ9H0V9 348 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 NSUN3Q9H649 340 aaKnown RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 RC3H2Q9HBD1 1191 aaKnown RBP21.31■■□□□ 1
CPSF2-203ENST00000554290 NID2Q14112 1375 aa21.31■■□□□ 1
CPSF2-203ENST00000554290 PUS10Q3MIT2 529 aaKnown RBP21.3■■□□□ 1
CPSF2-203ENST00000554290 TCEAL5Q5H9L2 206 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 ZNF484Q5JVG2 852 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 RTN4RL1Q86UN2 441 aaPredicted RBP21.3■■□□□ 1
CPSF2-203ENST00000554290 NPAS4Q8IUM7 802 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 CCDC60Q8IWA6 550 aaPredicted RBP21.3■■□□□ 1
CPSF2-203ENST00000554290 CKAP2LQ8IYA6 745 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 CCDC148Q8NFR7 591 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 PHKBQ93100 1093 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 COL1A2P08123 1366 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 NCOR1O75376 2440 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 XIRP2A4UGR9 3374 aa21.3■■□□□ 1
CPSF2-203ENST00000554290 ODR4Q5SWX8 454 aa21.29■■□□□ 1
CPSF2-203ENST00000554290 ZNF746Q6NUN9 644 aaPredicted RBP21.29■■□□□ 1
CPSF2-203ENST00000554290 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.29■■□□□ 1
CPSF2-203ENST00000554290 LINC01599Q8WXQ3 324 aa21.29■■□□□ 1
CPSF2-203ENST00000554290 PLVAPQ9BX97 442 aa21.29■■□□□ 1
CPSF2-203ENST00000554290 RNF26Q9BY78 433 aaPredicted RBP21.29■■□□□ 1
CPSF2-203ENST00000554290 NCK2O43639 380 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 PSAPP07602 524 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 LINC00271P0C7V0 271 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 IFNAR1P17181 557 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 PTCRAQ6ISU1 281 aaPredicted RBP21.28■■□□□ 1
CPSF2-203ENST00000554290 EP400NLQ6ZTU2 488 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 SMAP1Q8IYB5 467 aaPredicted RBP21.28■■□□□ 1
CPSF2-203ENST00000554290 CMTR2Q8IYT2 770 aaKnown RBP21.28■■□□□ 1
CPSF2-203ENST00000554290 PABPC5Q96DU9 382 aaKnown RBP21.28■■□□□ 1
CPSF2-203ENST00000554290 SLC26A6Q9BXS9 759 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 RNF216Q9NWF9 866 aaPredicted RBP21.28■■□□□ 1
CPSF2-203ENST00000554290 GINS2Q9Y248 185 aa21.28■■□□□ 1
CPSF2-203ENST00000554290 PDIA3P30101 505 aaKnown RBP21.27■■□□□ 1
CPSF2-203ENST00000554290 CIITAP33076 1130 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 NFX1Q12986 1120 aaKnown RBP21.27■■□□□ 1
CPSF2-203ENST00000554290 NTRK3Q16288 839 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 PRR16Q569H4 304 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 KIAA0319LQ8IZA0 1049 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 CRIPAKQ8N1N5 446 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 NEK9Q8TD19 979 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 BBXQ8WY36 941 aaPredicted RBP21.27■■□□□ 1
CPSF2-203ENST00000554290 UIMC1Q96RL1 719 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 LRFN2Q9ULH4 789 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 PCDHA10Q9Y5I2 948 aa21.27■■□□□ 1
CPSF2-203ENST00000554290 MAFBQ9Y5Q3 323 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms