RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PLA2G4FQ68DD2 849 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 LBX2Q6XYB7 198 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 EPM2AIP1Q7L775 607 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 PRRT2Q7Z6L0 340 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 FAM114A1Q8IWE2 563 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 TXNRD2Q9NNW7 524 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ABHD10Q9NUJ1 306 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ARHGAP6O43182 974 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 NRDCO43847 1150 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 FAM13AO94988 1023 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 DNM2P50570 870 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ERO1BQ86YB8 467 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 REXO1L1PQ8IX06 675 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 NSUN6Q8TEA1 469 aaKnown RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 PANX2Q96RD6 677 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 PPP2R2CQ9Y2T4 447 aa14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.09□□□□□ -0.15
VIPAS39-206ENST00000553888 SCN4AP35499 1836 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 MYH9P35579 1960 aaKnown RBP14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 ARHGEF35A5YM69 484 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 CLIC2O15247 247 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 STX10O60499 249 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 PPATQ06203 517 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 VWA3BQ502W6 1294 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 NCAPG2Q86XI2 1143 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 DAW1Q8N136 415 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 ANKRD35Q8N283 1001 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 SMCR8Q8TEV9 937 aaPredicted RBP14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 CHP1Q99653 195 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 NDST4Q9H3R1 872 aa14.08□□□□□ -0.15
VIPAS39-206ENST00000553888 UQCRHLA0A096LP55 91 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 HIP1RO75146 1068 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 P4HBP07237 508 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 UQCRHP07919 91 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 NF2P35240 595 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 NPEPPSP55786 919 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 IRX3P78415 501 aaPredicted RBP14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 FKBP3Q00688 224 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 APBA1Q02410 837 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 CCDC40Q4G0X9 1142 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 PADI6Q6TGC4 694 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 FIZ1Q96SL8 496 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 USO1O60763 962 aaKnown RBP14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 CNMDO75829 334 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 SP2Q02086 613 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 MAPK7Q13164 816 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 MOGSQ13724 837 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
VIPAS39-206ENST00000553888 ZNFX1Q9P2E3 1918 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 CENPFP49454 3210 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 FANCGO15287 622 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 KCNA2P16389 499 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 NR2F2P24468 414 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 QARSP47897 775 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 ADAM9Q13443 819 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 KNOP1Q1ED39 458 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 Q3C1V9 767 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 CNGA4Q8IV77 575 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 INPP4AQ96PE3 977 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 ZSWIM4Q9H7M6 989 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 KCND1Q9NSA2 647 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 FAM207AQ9NSI2 230 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 ZMYM2Q9UBW7 1377 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 A0A1W2PQC6 194 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 BACH1O14867 736 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 CLSTN1O94985 981 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 TRIM21P19474 475 aaKnown RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 CASP4P49662 377 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 RARRES1P49788 294 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 HERVK_113P62684 666 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 HSP90AA2PQ14568 343 aaPredicted RBP14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 MAN2A1Q16706 1144 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 SYT10Q6XYQ8 523 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 ACRBPQ8NEB7 543 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 PARVGQ9HBI0 331 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 PNMA2Q9UL42 364 aa14.07□□□□□ -0.16
VIPAS39-206ENST00000553888 MYPNQ86TC9 1320 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 ABL1P00519 1130 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 PGK2P07205 417 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 YWHABP31946 246 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 KCNJ6P48051 423 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 SOX10P56693 466 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 EEPD1Q7L9B9 569 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 NLRX1Q86UT6 975 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 ZC3H15Q8WU90 426 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 ARID3AQ99856 593 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 MOV10L1Q9BXT6 1211 aaKnown RBP14.06□□□□□ -0.16
VIPAS39-206ENST00000553888 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms