RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 ATP4AP20648 1035 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 MARK3P27448 753 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 QARSP47897 775 aaKnown RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 TOB1P50616 345 aaPredicted RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 ZNF200P98182 395 aaPredicted RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 SPIRE1Q08AE8 756 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 HIC1Q14526 733 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 ZNF174Q15697 407 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 TRIM71Q2Q1W2 868 aaKnown RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 XKR3Q5GH77 459 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 FAM26DQ5JW98 314 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 MARCH8Q5T0T0 291 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 PSRC1Q6PGN9 363 aaPredicted RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 CKAP2LQ8IYA6 745 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 EXOC8Q8IYI6 725 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 NEK9Q8TD19 979 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 GJA10Q969M2 543 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 NIFKQ9BYG3 293 aaKnown RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 WNT8AQ9H1J5 351 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
CHD8-206ENST00000553870 TUBE1Q9UJT0 475 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 PCDHA2Q9Y5H9 948 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 IGSF9BQ9UPX0 1349 aa10.5□□□□□ -0.73
CHD8-206ENST00000553870 DNAH12Q6ZR08 3092 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 RSPH10B2B2RC85 870 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 BMP15O95972 392 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 FGBP02675 491 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 OATP04181 439 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 OR52Z1P0C646 297 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 RSPH10BP0C881 870 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 XRCC6P12956 609 aaKnown RBP eCLIP10.49□□□□□ -0.73
CHD8-206ENST00000553870 CSF2RAP15509 400 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 SYT1P21579 422 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 PRPHP41219 470 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 TXKP42681 527 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 PDIA5Q14554 519 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 MTHFD1LQ6UB35 978 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 LRRC8DQ7L1W4 858 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 OTUD6AQ7L8S5 288 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 C4orf19Q8IY42 314 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 C4orf32Q8N8J7 132 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 DHX38Q92620 1227 aaKnown RBP10.49□□□□□ -0.73
CHD8-206ENST00000553870 HSD17B14Q9BPX1 270 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 RAB34Q9BZG1 259 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 MTIF3Q9H2K0 278 aaKnown RBP10.49□□□□□ -0.73
CHD8-206ENST00000553870 ZSCAN16Q9H4T2 348 aaPredicted RBP10.49□□□□□ -0.73
CHD8-206ENST00000553870 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
CHD8-206ENST00000553870 SQORQ9Y6N5 450 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 KAT6AQ92794 2004 aa10.49□□□□□ -0.73
CHD8-206ENST00000553870 EML1O00423 815 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 WNT7AO00755 349 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 ZNF862O60290 1169 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 SLITRK3O94933 977 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 LYPLA2O95372 231 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 CXCL10P02778 98 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 ACTN1P12814 892 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 MUTP22033 750 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 KLRC1P26715 233 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 THPOP40225 353 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.731e-8■■■■□ 24.4
CHD8-206ENST00000553870 CCL23P55773 120 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 IGBP1P78318 339 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 CDC42EP1Q00587 391 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 PRKCEQ02156 737 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 PTGDRQ13258 359 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 TARBP2Q15633 366 aaKnown RBP10.48□□□□□ -0.73
CHD8-206ENST00000553870 TMEM266Q2M3C6 531 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 LRIT3Q3SXY7 679 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 HABP4Q5JVS0 413 aaKnown RBP10.48□□□□□ -0.73
CHD8-206ENST00000553870 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 ZNF618Q5T7W0 954 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 IER5Q5VY09 327 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 ARL6IP4Q66PJ3 421 aaKnown RBP10.48□□□□□ -0.73
CHD8-206ENST00000553870 C16orf59Q7L2K0 433 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 HERVK_113Q902F9 699 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 JPH2Q9BR39 696 aaPredicted RBP10.48□□□□□ -0.73
CHD8-206ENST00000553870 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 UMODL1Q5DID0 1318 aa10.48□□□□□ -0.73
CHD8-206ENST00000553870 MYH9P35579 1960 aaKnown RBP10.47□□□□□ -0.73
CHD8-206ENST00000553870 VPS37CA5D8V6 355 aaPredicted RBP10.47□□□□□ -0.73
CHD8-206ENST00000553870 DDX11L8A8MPP1 907 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 ZBTB42B2RXF5 422 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 STX6O43752 255 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 STBD1O95210 358 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 TMOD1P28289 359 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 BECN1Q14457 450 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 SHHQ15465 462 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 TRAF7Q6Q0C0 670 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 USP38Q8NB14 1042 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 BANK1Q8NDB2 785 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 ERMNQ8TAM6 284 aa10.47□□□□□ -0.73
CHD8-206ENST00000553870 SCLYQ96I15 445 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms