RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 GPBP1Q86WP2 473 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 CCDC60Q8IWA6 550 aaPredicted RBP13.11□□□□□ -0.31
NEK9-202ENST00000553823 TRMT44Q8IYL2 757 aaKnown RBP13.11□□□□□ -0.31
NEK9-202ENST00000553823 TRIML1Q8N9V2 468 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 GPR20Q99678 358 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 BHMT2Q9H2M3 363 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
NEK9-202ENST00000553823 ANO10Q9NW15 660 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 SRRDQ9UH36 339 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 NRBP1Q9UHY1 535 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
NEK9-202ENST00000553823 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 HAX1O00165 279 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 ZBTB39O15060 712 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 SMPD1P17405 629 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 CYP11B2P19099 503 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 YWHABP31946 246 aaKnown RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 ASIC1P78348 528 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 MORC3Q14149 939 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 GSE1Q14687 1217 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 GJC2Q5T442 439 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 FAM160B1Q5W0V3 765 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 TRIB2Q92519 343 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 DDX12PQ92771 950 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 CCDC47Q96A33 483 aaKnown RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 EMID1Q96A84 441 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 RMND1Q9NWS8 449 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 DBR1Q9UK59 544 aaKnown RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 MAFBQ9Y5Q3 323 aaPredicted RBP13.1□□□□□ -0.31
NEK9-202ENST00000553823 IGSF9BQ9UPX0 1349 aa13.1□□□□□ -0.31
NEK9-202ENST00000553823 PVALEFA0A1B0GWK0 134 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 KLRC4O43908 158 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 ZNF862O60290 1169 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 LGR5O75473 907 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 KCNB1Q14721 858 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 KMT5BQ4FZB7 885 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 ISM2Q6H9L7 571 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 DYMQ7RTS9 669 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 AFAP1L1Q8TED9 768 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
NEK9-202ENST00000553823 DNAJC19Q96DA6 116 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
NEK9-202ENST00000553823 PCYT2Q99447 389 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
NEK9-202ENST00000553823 STBD1O95210 358 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 CAVIN2O95810 425 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
NEK9-202ENST00000553823 PTGS1P23219 599 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 RARRES1P49788 294 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 STAT5BP51692 787 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 PRKCEQ02156 737 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 ARSHQ5FYA8 562 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
NEK9-202ENST00000553823 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 UNC13DQ70J99 1090 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 GNEQ9Y223 722 aaKnown RBP13.08□□□□□ -0.32
NEK9-202ENST00000553823 PCNTO95613 3336 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 EMSYQ7Z589 1322 aa13.08□□□□□ -0.32
NEK9-202ENST00000553823 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 ADCY6O43306 1168 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 OATP04181 439 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 CYBAP13498 195 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 AKR1A1P14550 325 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 IDEP14735 1019 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 BMP6P22004 513 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 PRMT2P55345 433 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 ZNF658Q5TYW1 1059 aaPredicted RBP13.07□□□□□ -0.32
NEK9-202ENST00000553823 PADI6Q6TGC4 694 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 C1orf186Q6ZWK4 172 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 ANO5Q75V66 913 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 TRMT1LQ7Z2T5 733 aaKnown RBP13.07□□□□□ -0.32
NEK9-202ENST00000553823 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
NEK9-202ENST00000553823 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms