RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 A0A1W2PQH9 124 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 SHOXO15266 292 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 ECE2O60344 883 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 FARP2O94887 1054 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-223ENST00000553686 GPTP24298 496 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 GRAPQ13588 217 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 PPP2R5EQ16537 467 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 GNPTABQ3T906 1256 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
ATXN3-223ENST00000553686 PRAMEF18Q5VWM3 479 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 ZPBP2Q6X784 338 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 KIF6Q6ZMV9 814 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 GRAPLQ8TC17 118 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-223ENST00000553686 SH3TC2Q8TF17 1288 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 SHDQ96IW2 340 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 G6PC3Q9BUM1 346 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 MYOZ2Q9NPC6 264 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 PRR13Q9NZ81 148 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 SLC12A7Q9Y666 1083 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 RPTORQ8N122 1335 aa7.72□□□□□ -1.17
ATXN3-223ENST00000553686 ZNF609O15014 1411 aa7.71□□□□□ -1.17
ATXN3-223ENST00000553686 TMEM82A0PJX8 343 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 GJB1P08034 283 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 HMOX1P09601 288 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 ATF4P18848 351 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-223ENST00000553686 ZNF648Q5T619 568 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-223ENST00000553686 PRR23BQ6ZRT6 265 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 UBE2Q1Q7Z7E8 422 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 LILRA2Q8N149 483 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 ANKS4BQ8N8V4 417 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 BRF1Q92994 677 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 DSCC1Q9BVC3 393 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 UTP14AQ9BVJ6 771 aaKnown RBP7.71□□□□□ -1.18
ATXN3-223ENST00000553686 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 ZNF451Q9Y4E5 1061 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 MAP3K15Q6ZN16 1313 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 ARFGEF2Q9Y6D5 1785 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 BRCA2P51587 3418 aa7.71□□□□□ -1.18
ATXN3-223ENST00000553686 KCNQ3O43525 872 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 NTSR2O95665 410 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 VAV1P15498 845 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 CD247P20963 164 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 CTSKP43235 329 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 ZNF445P59923 1031 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 CHRNEQ04844 493 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 PRKG1Q13976 671 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 TCEAL1Q15170 157 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 NR0B2Q15466 257 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 TIGD5Q53EQ6 642 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 FAM109BQ6ICB4 259 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-223ENST00000553686 ZNF34Q8IZ26 560 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
ATXN3-223ENST00000553686 SHISA4Q96DD7 197 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 GDF15Q99988 308 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 GP6Q9HCN6 339 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 PCDHB10Q9UN67 800 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 AKAP11Q9UKA4 1901 aa7.7□□□□□ -1.18
ATXN3-223ENST00000553686 HTTP42858 3142 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 TTC28Q96AY4 2481 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 GSNP06396 782 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 HOXD10P28358 340 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 MMP14P50281 582 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 UBXN2AP68543 259 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 SLC14A2Q15849 920 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 CWF19L1Q69YN2 538 aaKnown RBP7.69□□□□□ -1.18
ATXN3-223ENST00000553686 TDHQ8IZJ6 230 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
ATXN3-223ENST00000553686 STRIP2Q9ULQ0 834 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 SCN7AQ01118 1682 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 RTL9Q8NET4 1388 aa7.69□□□□□ -1.18
ATXN3-223ENST00000553686 PSPNO60542 156 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 CASP7P55210 303 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 SLC7A5Q01650 507 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 MESP2Q0VG99 397 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 GNL2Q13823 731 aaKnown RBP7.68□□□□□ -1.18
ATXN3-223ENST00000553686 SNX17Q15036 470 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 CRTC3Q6UUV7 619 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 KSR1Q8IVT5 923 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 MAP6Q96JE9 813 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 DIRC2Q96SL1 478 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 KRTAP4-12Q9BQ66 201 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 CDADC1Q9BWV3 514 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 POLLQ9UGP5 575 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 GPR160Q9UJ42 338 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 SCAF8Q9UPN6 1271 aaKnown RBP7.68□□□□□ -1.18
ATXN3-223ENST00000553686 ANKRD26Q9UPS8 1709 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 UBN2Q6ZU65 1347 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 SCN11AQ9UI33 1791 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 CACNA1SQ13698 1873 aa7.68□□□□□ -1.18
ATXN3-223ENST00000553686 PAPPA2Q9BXP8 1791 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 NOTOA8MTQ0 251 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 E9PSI1 815 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 USP2O75604 605 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms