RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 VCAM1P19320 739 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 CASP1P29466 404 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 DNM2P50570 870 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 COPB1P53618 953 aaKnown RBP8.12□□□□□ -1.11
ATXN3-221ENST00000553498 RASSF7Q02833 373 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 LRMPQ12912 555 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 MCM6Q14566 821 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 KRT31Q15323 416 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 ANGEL2Q5VTE6 544 aaKnown RBP8.12□□□□□ -1.11
ATXN3-221ENST00000553498 ARMCX5Q6P1M9 558 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 CCDC174Q6PII3 467 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 CSGALNACT2Q8N6G5 542 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 SYT2Q8N9I0 419 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-221ENST00000553498 ADARB2Q9NS39 739 aaKnown RBP8.12□□□□□ -1.11
ATXN3-221ENST00000553498 INTS13Q9NVM9 706 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 HOXC10Q9NYD6 342 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 VAV3Q9UKW4 847 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 GDAQ9Y2T3 454 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF536O15090 1300 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF541Q9H0D2 1346 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 MYMKA6NI61 221 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PSMD10O75832 226 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 STAM2O75886 525 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 FLOT1O75955 427 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 EYA4O95677 639 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 NR3C2P08235 984 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 GAP43P17677 238 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PTPRAP18433 802 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 INPP5BP32019 993 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PRELPP51888 382 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 STX17P56962 302 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 STK4Q13043 487 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 NNTQ13423 1086 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 EPHA7Q15375 998 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 FIGNQ5HY92 759 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 FAM26FQ5R3K3 315 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 NBPF12Q5TAG4 269 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 LRCH2Q5VUJ6 765 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PCNX4Q63HM2 1172 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 OTOP1Q7RTM1 612 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 CCDC84Q86UT8 332 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 CATSPER3Q86XQ3 398 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 SMYD4Q8IYR2 804 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 MYOCDQ8IZQ8 938 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 CCAR2Q8N163 923 aaKnown RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 NLGN2Q8NFZ4 835 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 RDM1Q8NG50 284 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 DNAJC19Q96DA6 116 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 KLRG1Q96E93 195 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 CEP63Q96MT8 703 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PLIN2Q99541 437 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 P2RX7Q99572 595 aaKnown RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 BAG1Q99933 345 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-221ENST00000553498 HSD17B14Q9BPX1 270 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 MXRA8Q9BRK3 442 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 ARHGAP9Q9BRR9 750 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 TEKT3Q9BXF9 490 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 TANGO6Q9C0B7 1094 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 TBC1D22BQ9NU19 505 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 PANK4Q9NVE7 773 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 SEL1LQ9UBV2 794 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 ADAMTS5Q9UNA0 930 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 KIAA1024Q9UPX6 916 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 MAP4K5Q9Y4K4 846 aa8.11□□□□□ -1.11
ATXN3-221ENST00000553498 SHTN1A0MZ66 631 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 VWA5AO00534 786 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 PPP1R12BO60237 982 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 GAS7O60861 476 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 EGFRP00533 1210 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 KRT18P05783 430 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 CYP11B2P19099 503 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 HOXA13P31271 388 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 SLC12A3P55017 1021 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 MARSP56192 900 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 SNAP25P60880 206 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 FKBP3Q00688 224 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 PPP2R3AQ06190 1150 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 COASYQ13057 564 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 SPP2Q13103 211 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 COG2Q14746 738 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 PTPN14Q15678 1187 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 ZYXQ15942 572 aaKnown RBP8.1□□□□□ -1.11
ATXN3-221ENST00000553498 EDRF1Q3B7T1 1238 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 FKBP15Q5T1M5 1219 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 NCAPH2Q6IBW4 605 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 B3GNT9Q6UX72 402 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 STXBP4Q6ZWJ1 553 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 GPBP1Q86WP2 473 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 TMTC1Q8IUR5 882 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 MB21D1Q8N884 522 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 TC2NQ8N9U0 490 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 KIAA0895Q8NCT3 520 aa8.1□□□□□ -1.11
ATXN3-221ENST00000553498 LRRC15Q8TF66 581 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms