RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PLXNA4Q9HCM2 1894 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 H3BNC9 293 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 SEC24BO95487 1268 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 HOXC8P31273 242 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 NAPAP54920 295 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 FGD1P98174 961 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 BTG3Q14201 252 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-208ENST00000553370 RNF20Q5VTR2 975 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 RUFY4Q6ZNE9 571 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 GJD3Q8N144 294 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 SEPT1Q8WYJ6 367 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-208ENST00000553370 METRNQ9UJH8 293 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 TRIOO75962 3097 aa11.34□□□□□ -0.59
ACTN1-208ENST00000553370 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 MEIS2O14770 477 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 RPLP2P05387 115 aaKnown RBP11.33□□□□□ -0.6
ACTN1-208ENST00000553370 IL9P15248 144 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 SMARCA1P28370 1054 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 ZNF76P36508 570 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 MRPS6P82932 125 aaKnown RBP11.33□□□□□ -0.6
ACTN1-208ENST00000553370 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 IER5Q5VY09 327 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 TSHZ1Q6ZSZ6 1077 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
ACTN1-208ENST00000553370 DNAJB3Q8WWF6 145 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 PPP2R3CQ969Q6 453 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 MTA3Q9BTC8 594 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 LRFN3Q9BTN0 628 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 LRRC2Q9BYS8 371 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 SLC9A2Q9UBY0 812 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 LRFN2Q9ULH4 789 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 CDY2AQ9Y6F7 541 aa11.33□□□□□ -0.6
ACTN1-208ENST00000553370 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.32□□□□□ -0.6
ACTN1-208ENST00000553370 RRN3P2A6NIE6 340 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 BACH1O14867 736 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 SLC27A2O14975 620 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 NCK2O43639 380 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 CHRNA1P02708 482 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 ALADP13716 330 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 KCNA2P16389 499 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 ADCY7P51828 1080 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 PAK2Q13177 524 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 CLUL1Q15846 466 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 SPOUT1Q5T280 376 aaKnown RBP11.32□□□□□ -0.6
ACTN1-208ENST00000553370 CREB3L3Q68CJ9 461 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 PABPC5Q96DU9 382 aaKnown RBP11.32□□□□□ -0.6
ACTN1-208ENST00000553370 IGFLR1Q9H665 355 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 RBM28Q9NW13 759 aaKnown RBP11.32□□□□□ -0.6
ACTN1-208ENST00000553370 PCDHA6Q9UN73 950 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 PCDHA8Q9Y5H6 950 aa11.32□□□□□ -0.6
ACTN1-208ENST00000553370 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
ACTN1-208ENST00000553370 ATP9AO75110 1047 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 ITGB5P18084 799 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 LIFRP42702 1097 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 TMEM62Q0P6H9 643 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 LPIN1Q14693 890 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 RTN1Q16799 776 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 PAN2Q504Q3 1202 aaKnown RBP11.31□□□□□ -0.6
ACTN1-208ENST00000553370 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 FANCBQ8NB91 859 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 FTHL17Q9BXU8 183 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 LMAN2LQ9H0V9 348 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 JADE2Q9NQC1 790 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 GINS2Q9Y248 185 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 TRPV2Q9Y5S1 764 aa11.31□□□□□ -0.6
ACTN1-208ENST00000553370 GSTTP1A0A1W2PQM5 241 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 GOLGA8AA7E2F4 631 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 GOLGA8BA8MQT2 603 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 DDX39AO00148 427 aaKnown RBP11.3□□□□□ -0.6
ACTN1-208ENST00000553370 MAFGO15525 162 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 ZBTB43O43298 467 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 RB1P06400 928 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 INSRRP14616 1297 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 CD52P31358 61 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 NDUFV1P49821 464 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 FBXO47Q5MNV8 452 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 FAM160B1Q5W0V3 765 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 CKAP2LQ8IYA6 745 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.3□□□□□ -0.6
ACTN1-208ENST00000553370 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
ACTN1-208ENST00000553370 PGBD1Q96JS3 809 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
ACTN1-208ENST00000553370 OSBPL7Q9BZF2 842 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
ACTN1-208ENST00000553370 UBIAD1Q9Y5Z9 338 aa11.3□□□□□ -0.6
ACTN1-208ENST00000553370 DENND3A2RUS2 1198 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 GPR37L1O60883 481 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 FOSP01100 380 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-208ENST00000553370 SCG2P13521 617 aa11.29□□□□□ -0.6
ACTN1-208ENST00000553370 BMPR1AP36894 532 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms