RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SMIM35A0A1B0GVV1 85 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 LCHNA4D1U4 455 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 M0QZ92 97 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 M0R2N6 131 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 MSH4O15457 936 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 GTPBP6O43824 516 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-207ENST00000553290 EDIL3O43854 480 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 ARHGEF15O94989 841 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 GHRP10912 638 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 POU3F3P20264 500 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-207ENST00000553290 AK2P54819 239 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 ZNF484Q5JVG2 852 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 FAM117BQ6P1L5 589 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 MTHFD1LQ6UB35 978 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 KRT25Q7Z3Z0 450 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 USP38Q8NB14 1042 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 TRAPPC12Q8WVT3 735 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 ARNTL2Q8WYA1 636 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 TOP1MTQ969P6 601 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 AIFM3Q96NN9 605 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 RIT2Q99578 217 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 FAM49AQ9H0Q0 323 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-207ENST00000553290 CERS4Q9HA82 394 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 SAMM50Q9Y512 469 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 MAFBQ9Y5Q3 323 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-207ENST00000553290 CDY2AQ9Y6F7 541 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 COL1A2P08123 1366 aa14.67□□□□□ -0.06
ACTN1-207ENST00000553290 SIP14410 1827 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 CYP3A7-CYP3A51PA0A087WV96 503 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 WDR64B1ANS9 1081 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 CYP3A7P24462 503 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 HTRA4P83105 476 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-207ENST00000553290 LPIN1Q14693 890 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 NONOQ15233 471 aaKnown RBP eCLIP14.66□□□□□ -0.06
ACTN1-207ENST00000553290 NPY5RQ15761 445 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 Q4G0T1 1027 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 FBXO47Q5MNV8 452 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 TSHZ1Q6ZSZ6 1077 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 CKAP2LQ8IYA6 745 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 BBXQ8WY36 941 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-207ENST00000553290 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 WASF1Q92558 559 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 TGS1Q96RS0 853 aaKnown RBP14.66□□□□□ -0.06
ACTN1-207ENST00000553290 TRPV2Q9Y5S1 764 aa14.66□□□□□ -0.06
ACTN1-207ENST00000553290 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-207ENST00000553290 LINC01553A4QN01 128 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 RFXAPO00287 272 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 GAS7O60861 476 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 KLRC1P26715 233 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 SFNP31947 248 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 NEK4P51957 841 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 ERVK-21P61565 698 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 CCDC85BQ15834 202 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-207ENST00000553290 LRCH2Q5VUJ6 765 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 MOXD1Q6UVY6 613 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 SLC5A5Q92911 643 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 ZBTB10Q96DT7 871 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 PHF20Q9BVI0 1012 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 TEKT3Q9BXF9 490 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 DISC1Q9NRI5 854 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 GABBR1Q9UBS5 961 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 KCNJ14Q9UNX9 436 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 KDM3AQ9Y4C1 1321 aa14.65□□□□□ -0.06
ACTN1-207ENST00000553290 CCDC194A0A1B0GVG4 234 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 EPOPA6NHQ4 379 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 UPP2O95045 317 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 CTDNEP1O95476 244 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 ATP4AP20648 1035 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 JAK3P52333 1124 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 FAM43BQ6ZT52 329 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-207ENST00000553290 RDM1Q8NG50 284 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-207ENST00000553290 FAM167AQ96KS9 214 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 MBOAT7Q96N66 472 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 YME1L1Q96TA2 773 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 CELF4Q9BZC1 486 aaKnown RBP14.64□□□□□ -0.07
ACTN1-207ENST00000553290 TSPYL2Q9H2G4 693 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-207ENST00000553290 ORC3Q9UBD5 711 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-207ENST00000553290 CEP131Q9UPN4 1083 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 MTCH2Q9Y6C9 303 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 WDR81Q562E7 1941 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 IGSF9BQ9UPX0 1349 aa14.64□□□□□ -0.07
ACTN1-207ENST00000553290 EVPLQ92817 2033 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 LOXHD1Q8IVV2 1947 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 ZBTB42B2RXF5 422 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 RBAK-RBAKDNI3L0D1 243 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 PSMD10O75832 226 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 SEC24BO95487 1268 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 TDP2O95551 362 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 TMEM62Q0P6H9 643 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 ME3Q16798 604 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 INF2Q27J81 1249 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 KIAA0319LQ8IZA0 1049 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 MICALL1Q8N3F8 863 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 GTF3C6Q969F1 213 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 SAMD11Q96NU1 681 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 FTHL17Q9BXU8 183 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 NRBP2Q9NSY0 501 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 LMCD1Q9NZU5 365 aa14.63□□□□□ -0.07
ACTN1-207ENST00000553290 REV3LO60673 3130 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms