RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 ZBTB10Q96DT7 871 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 UPF3BQ9BZI7 483 aaKnown RBP13.53□□□□□ -0.24
CKAP4-202ENST00000552828 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
CKAP4-202ENST00000552828 RIC8AQ9NPQ8 531 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
CKAP4-202ENST00000552828 MYO7AQ13402 2215 aa13.53□□□□□ -0.24
CKAP4-202ENST00000552828 IGKV6D-21A0A0A0MT36 114 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 MEIS1O00470 390 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 MBTPS2O43462 519 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 TBX10O75333 385 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 EYA4O95677 639 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 FOSP01100 380 aaPredicted RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 DNAJB1P25685 340 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 IRS1P35568 1242 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 SLC26A2P50443 739 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 STAT5BP51692 787 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 FUT2Q10981 343 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 SMAD4Q13485 552 aaKnown RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 CEP55Q53EZ4 464 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 SPPL3Q8TCT6 385 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 CELF4Q9BZC1 486 aaKnown RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 AGO4Q9HCK5 861 aaKnown RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 ALG13Q9NP73 1137 aaKnown RBP13.52□□□□□ -0.25
CKAP4-202ENST00000552828 TRPC6Q9Y210 931 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 WDFY4Q6ZS81 3184 aa13.52□□□□□ -0.25
CKAP4-202ENST00000552828 NLRC5Q86WI3 1866 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 M0QZ92 97 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 EPB41L2O43491 1005 aaKnown RBP13.51□□□□□ -0.25
CKAP4-202ENST00000552828 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
CKAP4-202ENST00000552828 ITGB1P05556 798 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 ARP10275 920 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 SCG2P13521 617 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 PAK2Q13177 524 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 CSPP1Q1MSJ5 1256 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 HERC4Q5GLZ8 1057 aaPredicted RBP13.51□□□□□ -0.25
CKAP4-202ENST00000552828 MTHFD1LQ6UB35 978 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 EFHBQ8N7U6 833 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 TRAPPC12Q8WVT3 735 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 MSLNLQ96KJ4 702 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 TMX1Q9H3N1 280 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 CD207Q9UJ71 328 aa13.51□□□□□ -0.25
CKAP4-202ENST00000552828 CNTNAP5Q8WYK1 1306 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 LINC01565O15544 149 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 CLK2P49760 499 aaKnown RBP13.5□□□□□ -0.25
CKAP4-202ENST00000552828 KRT76Q01546 638 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 TMEM62Q0P6H9 643 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 COASYQ13057 564 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 KRT32Q14532 448 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 CLUL1Q15846 466 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 ABHD15Q6UXT9 468 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 NIPA1Q7RTP0 329 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 MICU3Q86XE3 530 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
CKAP4-202ENST00000552828 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 UIMC1Q96RL1 719 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 IGFLR1Q9H665 355 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
CKAP4-202ENST00000552828 CLEC1BQ9P126 229 aa13.5□□□□□ -0.25
CKAP4-202ENST00000552828 CCNE2O96020 404 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 HSPA4P34932 840 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 SREBF1P36956 1147 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 SARSP49591 514 aaKnown RBP13.49□□□□□ -0.25
CKAP4-202ENST00000552828 NAPAP54920 295 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
CKAP4-202ENST00000552828 AP3B2Q13367 1082 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 RASEFQ8IZ41 740 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 KIAA0319LQ8IZA0 1049 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 ATP8B4Q8TF62 1192 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 CRYGNQ8WXF5 182 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 NEK1Q96PY6 1258 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 ANO3Q9BYT9 981 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 BARHL2Q9NY43 387 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 KAT6AQ92794 2004 aa13.49□□□□□ -0.25
CKAP4-202ENST00000552828 COL1A2P08123 1366 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 ZBTB42B2RXF5 422 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 STXBP3O00186 592 aa13.48□□□□□ -0.25
CKAP4-202ENST00000552828 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms