RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TUBE1Q9UJT0 475 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 BCRP11274 1271 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 KCTD2Q14681 263 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 SEL1L2Q5TEA6 688 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 APOBEC3HQ6NTF7 200 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 MOB2Q70IA6 237 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 USP37Q86T82 979 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 THOC1Q96FV9 657 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 ZNRF3Q9ULT6 936 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 NFAT5O94916 1531 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 PALM3A6NDB9 673 aaPredicted RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 GOLGA6CA6NDK9 693 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 RBAK-RBAKDNI3L0D1 243 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 HIP1RO75146 1068 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 GOLGA6DP0CG33 693 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 PSMC2P35998 433 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 SRGAP1Q7Z6B7 1085 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 SLC7A3Q8WY07 619 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 NAP1L4Q99733 375 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 GOLGA6AQ9NYA3 693 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 WDR19Q8NEZ3 1342 aa11.75□□□□□ -0.53
TGFBR1-209ENST00000552516 LTN1O94822 1766 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 PGK2P07205 417 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 ZBED6P86452 979 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 IL17AQ16552 155 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 OTUD6AQ7L8S5 288 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 RIC8AQ9NPQ8 531 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 GBP2P32456 591 aaPredicted RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 RDXP35241 583 aaKnown RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 ORC1Q13415 861 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 CDO1Q16878 200 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 IPO4Q8TEX9 1081 aaKnown RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 TBK1Q9UHD2 729 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 MRPL42Q9Y6G3 142 aaKnown RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 GOLGA6L7A0A1B0GV03 622 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 KRT71Q3SY84 523 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 ADSSL1Q8N142 457 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 LRRC71Q8N4P6 559 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 BCAS3Q9H6U6 928 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 STK17AQ9UEE5 414 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 ASTN2O75129 1339 aaPredicted RBP11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 LAD1O00515 517 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 SPZ1Q9BXG8 430 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 TSGA10Q9BZW7 698 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 ZMYND12Q9H0C1 365 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 AS3MTQ9HBK9 375 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 NFU1Q9UMS0 254 aa11.74□□□□□ -0.53
TGFBR1-209ENST00000552516 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 HEXIM1O94992 359 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 VIMP08670 466 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 YARSP54577 528 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 PLTPP55058 493 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 NFX1Q12986 1120 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 GRB10Q13322 594 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 MICALL1Q8N3F8 863 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 TRIM58Q8NG06 486 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 LMBR1Q8WVP7 490 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 AMFRQ9UKV5 643 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 ACTN2P35609 894 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 MXI1P50539 228 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 CEP55Q53EZ4 464 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 MCF2L2Q86YR7 1114 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 DDX47Q9H0S4 455 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 SALL1Q9NSC2 1324 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 EFCAB8A8MWE9 144 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 RPS6P62753 249 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 CALCOCO2Q13137 446 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 FAM76AQ8TAV0 307 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 C1orf112Q9NSG2 853 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 THAP12O43422 761 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 RHBDL3P58872 404 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 RHPN2Q8IUC4 686 aa11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 NOA1Q8NC60 698 aaKnown RBP11.73□□□□□ -0.53
TGFBR1-209ENST00000552516 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 TMEM191BP0C7N4 346 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 NR1I3Q14994 352 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 CPLX4Q7Z7G2 160 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 CCDC63Q8NA47 563 aa11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 MED1Q15648 1581 aaPredicted RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 GCFC2P16383 781 aaKnown RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 GPR161Q8N6U8 529 aaKnown RBP11.72□□□□□ -0.53
TGFBR1-209ENST00000552516 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms