RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 DDX39AO00148 427 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 VWA5AO00534 786 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 NOL4O94818 638 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 ZNF131P52739 623 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 RPS6P62753 249 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 KCNH2Q12809 1159 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 PRAMEF18Q5VWM3 479 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 FBXO38Q6PIJ6 1188 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 BANK1Q8NDB2 785 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 ATG4CQ96DT6 458 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 LSM14BQ9BX40 385 aaKnown RBP15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 PARVGQ9HBI0 331 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 ODF2LQ9ULJ1 636 aa15.44■□□□□ 0.06
RAB3IP-216ENST00000552199 KRT86O43790 486 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 NR3C1P04150 777 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 PLEKP08567 350 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 RPL13P26373 211 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 EIF4A3P38919 411 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 RSRC2Q7L4I2 434 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 NLGN2Q8NFZ4 835 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 TRPM4Q8TD43 1214 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 NUCKS1Q9H1E3 243 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 ARMCX3Q9UH62 379 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 TFR2Q9UP52 801 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 ARHGEF35A5YM69 484 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 RCCD1A6NED2 376 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 ZNF263O14978 683 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 SLC16A3O15427 465 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 LCA5LO95447 670 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 P4HBP07237 508 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 H2AFXP16104 143 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 EIF2AK2P19525 551 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 NMT1P30419 496 aaKnown RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 KCNA1Q09470 495 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 ITGB3BPQ13352 177 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 PGM5Q15124 567 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 SPA17Q15506 151 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 C12orf42Q96LP6 360 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 LACRTQ9GZZ8 138 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 GPRC5DQ9NZD1 345 aa15.43■□□□□ 0.06
RAB3IP-216ENST00000552199 RLFQ13129 1914 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 PHIPQ8WWQ0 1821 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 TGFB1I1O43294 461 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 AKAP3O75969 853 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 EPS15P42566 896 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 VAV2P52735 878 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 CYP27A1Q02318 531 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 MTMR1Q13613 665 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 RNF207Q6ZRF8 634 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 ZNF720Q7Z2F6 126 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 WNK4Q96J92 1243 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 FIZ1Q96SL8 496 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 CRACR2AQ9BSW2 395 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 ZSWIM4Q9H7M6 989 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 METTL14Q9HCE5 456 aaKnown RBP15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 NLRC4Q9NPP4 1024 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 TBC1D22BQ9NU19 505 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 MYH11P35749 1972 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 UBE4BO95155 1302 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 ZMYM2Q9UBW7 1377 aa15.42■□□□□ 0.06
RAB3IP-216ENST00000552199 COL11A1P12107 1806 aaPredicted RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 C19orf81C9J6K1 198 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 KIF11P52732 1056 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 NFIL3Q16649 462 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 ZC2HC1CQ53FD0 456 aaPredicted RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 EHBP1Q8NDI1 1231 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 REPS2Q8NFH8 660 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 RMDN3Q96TC7 470 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 ARID3AQ99856 593 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 PDCD2LQ9BRP1 358 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 PXMP2Q9NR77 195 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 FZD1Q9UP38 647 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 ZHX2Q9Y6X8 837 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 SSU72P8A0A1W2PR75 194 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 CLIC2O15247 247 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 AFPP02771 609 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 EPB41P11171 864 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 MYCLP12524 364 aaPredicted RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 DSG3P32926 999 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 POLR2FP61218 127 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 AMPD2Q01433 879 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 ASTE1Q2TB18 679 aaPredicted RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 SFMBT2Q5VUG0 894 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 HGSNATQ68CP4 663 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 NSMFQ6X4W1 530 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 STXBP4Q6ZWJ1 553 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 FAM178BQ8IXR5 827 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 GOLGA1Q92805 767 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 KLRG1Q96E93 195 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 TSGA10Q9BZW7 698 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms