RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 LRRN2O75325 713 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 CFHP08603 1231 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 GOLGA8HP0CJ92 632 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 MTHFRP42898 656 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 MARCH8Q5T0T0 291 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 C1orf210Q8IVY1 113 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 DNAJB3Q8WWF6 145 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 MRPS27Q92552 414 aaKnown RBP11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 CASP10Q92851 521 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 KIF1BPQ96EK5 621 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 PDCD2LQ9BRP1 358 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 UBA5Q9GZZ9 404 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 PCDHB12Q9Y5F1 795 aa11.95□□□□□ -0.5
SLC48A1-209ENST00000552003 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 MYH6P13533 1939 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 SRGAP2BP0DMP2 458 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 SNHG28P0DPA3 235 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 SCG2P13521 617 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 IBSPP21815 317 aaPredicted RBP11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 SDHBP21912 280 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 PBX3P40426 434 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 TBC1D8BQ0IIM8 1120 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 ZC3H14Q6PJT7 736 aaKnown RBP11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 LRRC55Q6ZSA7 311 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 VSIG10LQ86VR7 867 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 THNSL1Q8IYQ7 743 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 GPR20Q99678 358 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 TBC1D17Q9HA65 648 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 PADI3Q9ULW8 664 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 CA14Q9ULX7 337 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 DOCK8Q8NF50 2099 aa11.94□□□□□ -0.5
SLC48A1-209ENST00000552003 NBEAQ8NFP9 2946 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 C2orf71A6NGG8 1288 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 TBKBP1A7MCY6 615 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 PRR5-ARHGAP8B1AHC4 643 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 STK25O00506 426 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 RNF113AO15541 343 aaKnown RBP11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 TOP1P11387 765 aaKnown RBP11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 ARHGAP8P85298 464 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 PLCB3Q01970 1234 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 SPOUT1Q5T280 376 aaKnown RBP11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 MLXIPQ9HAP2 919 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 ENTPD7Q9NQZ7 604 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 WNT16Q9UBV4 365 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 DBR1Q9UK59 544 aaKnown RBP11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 PNMA2Q9UL42 364 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 LZTS1Q9Y250 596 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 DSPP15924 2871 aaKnown RBP11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 PATJQ8NI35 1801 aa11.93□□□□□ -0.5
SLC48A1-209ENST00000552003 MBLAC1A4D2B0 266 aaPredicted RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 KINO60870 393 aaKnown RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 STAG3L1P0CL83 205 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 GNAT1P11488 350 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 EPCAMP16422 314 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 GNAT2P19087 354 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 LMNB2Q03252 620 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 CDC37Q16543 378 aaPredicted RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 UTP14CQ5TAP6 766 aaKnown RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 ZKSCAN2Q63HK3 967 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 KBTBD3Q8NAB2 608 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
SLC48A1-209ENST00000552003 ABCB11O95342 1321 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 NRCAMQ92823 1304 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 FGRP09769 529 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 FGFR1P11362 822 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 PDE4AP27815 886 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 PMLP29590 882 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 SARSP49591 514 aaKnown RBP11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 HSD17B4P51659 736 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 MRPS6P82932 125 aaKnown RBP11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 TMEM62Q0P6H9 643 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 PGM5Q15124 567 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 TMEM266Q2M3C6 531 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 TMC5Q6UXY8 1006 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 CYFIP1Q7L576 1253 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 FTHL17Q9BXU8 183 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 FOXQ1Q9C009 403 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 MAF1Q9H063 256 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 NAPBQ9H115 298 aa11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 NGRNQ9NPE2 291 aaKnown RBP11.91□□□□□ -0.5
SLC48A1-209ENST00000552003 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms