RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 BRMS1Q9HCU9 246 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 DISC1Q9NRI5 854 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 DDX25Q9UHL0 483 aaKnown RBP21.47■■□□□ 1.03
DDX54-208ENST00000551344 SAMM50Q9Y512 469 aa21.47■■□□□ 1.03
DDX54-208ENST00000551344 PSMD10O75832 226 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 GCFC2P16383 781 aaKnown RBP21.46■■□□□ 1.03
DDX54-208ENST00000551344 ATP4AP20648 1035 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 KRT2P35908 639 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 TCTN1Q2MV58 587 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 LETM2Q2VYF4 491 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 MTHFD1LQ6UB35 978 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 NEK8Q86SG6 692 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 NME8Q8N427 588 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 RDM1Q8NG50 284 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 OXER1Q8TDS5 423 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 APBB2Q92870 758 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 NAP1L4Q99733 375 aaKnown RBP21.46■■□□□ 1.03
DDX54-208ENST00000551344 LLPHQ9BRT6 129 aaKnown RBP21.46■■□□□ 1.03
DDX54-208ENST00000551344 GABBR1Q9UBS5 961 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 COL1A2P08123 1366 aa21.46■■□□□ 1.03
DDX54-208ENST00000551344 SMIM35A0A1B0GVV1 85 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 JAK2O60674 1132 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 JAK3P52333 1124 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 MGAT3Q09327 533 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 IER5Q5VY09 327 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 PIK3AP1Q6ZUJ8 805 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 CKAP2LQ8IYA6 745 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 ETNPPLQ8TBG4 499 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 TRAPPC12Q8WVT3 735 aa21.45■■□□□ 1.02
DDX54-208ENST00000551344 UPF2Q9HAU5 1272 aaKnown RBP21.45■■□□□ 1.02
DDX54-208ENST00000551344 SH2B1Q9NRF2 756 aaPredicted RBP21.45■■□□□ 1.02
DDX54-208ENST00000551344 MYOGP15173 224 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 KLRC1P26715 233 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 TRIM29Q14134 588 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 MYLIPQ8WY64 445 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 FAM167AQ96KS9 214 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 FAM20AQ96MK3 541 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 OSBPL7Q9BZF2 842 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 UNC45AQ9H3U1 944 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 SQORQ9Y6N5 450 aa21.44■■□□□ 1.02
DDX54-208ENST00000551344 MMP1P03956 469 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 DEFB103AP81534 67 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 MRPS6P82932 125 aaKnown RBP21.43■■□□□ 1.02
DDX54-208ENST00000551344 MKRN4PQ13434 485 aaPredicted RBP21.43■■□□□ 1.02
DDX54-208ENST00000551344 RABEP1Q15276 862 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 PPP2R2DQ66LE6 453 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 B3GNT9Q6UX72 402 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 CCDC83Q8IWF9 413 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 TNFRSF25Q93038 417 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 GJA10Q969M2 543 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 ZBTB10Q96DT7 871 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 ZBED2Q9BTP6 218 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 IFIH1Q9BYX4 1025 aaKnown RBP21.43■■□□□ 1.02
DDX54-208ENST00000551344 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
DDX54-208ENST00000551344 NRBP2Q9NSY0 501 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 CEP131Q9UPN4 1083 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 CDY2AQ9Y6F7 541 aa21.43■■□□□ 1.02
DDX54-208ENST00000551344 ZBTB42B2RXF5 422 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 M0QZ92 97 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 TBX3O15119 743 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 TLL1O43897 1013 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 CCNT1O60563 726 aaKnown RBP21.42■■□□□ 1.02
DDX54-208ENST00000551344 GJB5O95377 273 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 AMHP03971 560 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 NR5A1Q13285 461 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 MYO9BQ13459 2157 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 KRT40Q6A162 431 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 MIER3Q7Z3K6 550 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 USP38Q8NB14 1042 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 RAD9AQ99638 391 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 KCNMB3Q9NPA1 279 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 IGSF9BQ9UPX0 1349 aa21.42■■□□□ 1.02
DDX54-208ENST00000551344 BTBD18B2RXH4 712 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 CHMP2AO43633 222 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 SLC37A4O43826 429 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 CA3P07451 260 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 GHRP10912 638 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 FOSL2P15408 326 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
DDX54-208ENST00000551344 LPIN1Q14693 890 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 EARS2Q5JPH6 523 aaKnown RBP21.41■■□□□ 1.02
DDX54-208ENST00000551344 FBXO47Q5MNV8 452 aa21.41■■□□□ 1.02
DDX54-208ENST00000551344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDX54-208ENST00000551344 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 MYH9P35579 1960 aaKnown RBP21.4■■□□□ 1.02
DDX54-208ENST00000551344 MAGEB2O15479 319 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 ZNF862O60290 1169 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 TRMT1LQ7Z2T5 733 aaKnown RBP21.4■■□□□ 1.02
DDX54-208ENST00000551344 DIS3L2Q8IYB7 885 aaKnown RBP21.4■■□□□ 1.02
DDX54-208ENST00000551344 KIAA0319LQ8IZA0 1049 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 GAS2L1Q99501 681 aaPredicted RBP21.4■■□□□ 1.02
DDX54-208ENST00000551344 CELF4Q9BZC1 486 aaKnown RBP21.4■■□□□ 1.02
DDX54-208ENST00000551344 PRDM12Q9H4Q4 367 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 TRPV2Q9Y5S1 764 aa21.4■■□□□ 1.02
DDX54-208ENST00000551344 ST18O60284 1047 aa21.39■■□□□ 1.01
DDX54-208ENST00000551344 OATP04181 439 aa21.39■■□□□ 1.01
DDX54-208ENST00000551344 PPP2R5CQ13362 524 aa21.39■■□□□ 1.01
DDX54-208ENST00000551344 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.01
DDX54-208ENST00000551344 TSHZ1Q6ZSZ6 1077 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms