RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SEMA3GQ9NS98 782 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 MKS1Q9NXB0 559 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 H2AFY2Q9P0M6 372 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 MARCH2Q9P0N8 246 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 U3KQE9 123 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 KIDINS220Q9ULH0 1771 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 TULP4Q9NRJ4 1543 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 PZPP20742 1482 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 NCOA2Q15596 1464 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 C22orf46C9J442 243 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 HIP1RO75146 1068 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-206ENST00000550987 GNALP38405 381 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 JAM2P57087 298 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 TEKQ02763 1124 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 TEX2Q8IWB9 1127 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 TTC8Q8TAM2 541 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 ASB11Q8WXH4 323 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 FCRL2Q96LA5 508 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-206ENST00000550987 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 VTA1Q9NP79 307 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 TOMM22Q9NS69 142 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 C14orf119Q9NWQ9 140 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 ERVK13-1Q9NX77 482 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 GULP1Q9UBP9 304 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 FBXL7Q9UJT9 491 aa6.86□□□□□ -1.31
CPSF6-206ENST00000550987 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
CPSF6-206ENST00000550987 A0A1W2PQJ5 194 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 FAM181BA6NEQ2 426 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 GOLGA8AA7E2F4 631 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 GOLGA8BA8MQT2 603 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 KCNK3O14649 394 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 U2AF1L5P0DN76 240 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 SLC9A1P19634 815 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 LSP1P33241 339 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 SCAND1P57086 179 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 IRF9Q00978 393 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 U2AF1Q01081 240 aaKnown RBP eCLIP6.85□□□□□ -1.314e-7■■□□□ 13.8
CPSF6-206ENST00000550987 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 CLUL1Q15846 466 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 GFOD2Q3B7J2 385 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 GORABQ5T7V8 394 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 FAM102BQ5T8I3 360 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 CCSAPQ6IQ19 270 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 PTRH1Q86Y79 214 aaKnown RBP6.85□□□□□ -1.31
CPSF6-206ENST00000550987 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 DPF3Q92784 378 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 FAM122AQ96E09 287 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 FAXDC2Q96IV6 333 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 HRASLS5Q96KN8 279 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 SP110Q9HB58 689 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 TNFRSF10DQ9UBN6 386 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 ADGRE2Q9UHX3 823 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 ARHGAP35Q9NRY4 1499 aa6.85□□□□□ -1.31
CPSF6-206ENST00000550987 PLEKHD1A6NEE1 506 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 RNF225M0QZC1 329 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 ESR1P03372 595 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 MYL1P05976 194 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 FPR2P25090 351 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 RECQLP46063 649 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 HNRNPMP52272 730 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 FSTL1Q12841 308 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 BIRC2Q13490 618 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 HDAC1Q13547 482 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 HLTFQ14527 1009 aaKnown RBP eCLIP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 MAP9Q49MG5 647 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 KSR2Q6VAB6 950 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 OTOP1Q7RTM1 612 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 RASSF3Q86WH2 238 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 TCEAL8Q8IYN2 117 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 KIAA1958Q8N8K9 716 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 TMEM52Q8NDY8 209 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 DCAF5Q96JK2 942 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 RTFDC1Q9BY42 306 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-206ENST00000550987 EPB41L1Q9H4G0 881 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 ANKRD6Q9Y2G4 727 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 SPO11Q9Y5K1 396 aa6.84□□□□□ -1.31
CPSF6-206ENST00000550987 GPATCH8Q9UKJ3 1502 aaKnown RBP6.83□□□□□ -1.32
CPSF6-206ENST00000550987 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 K7ESF4 209 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 KRIT1O00522 736 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 SCDO00767 359 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 XPOTO43592 962 aaKnown RBP6.83□□□□□ -1.32
CPSF6-206ENST00000550987 RFPL1O75677 317 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 KIF11P52732 1056 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 TCIRG1Q13488 830 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 ACAP2Q15057 778 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 PCBP2Q15366 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
CPSF6-206ENST00000550987 SLC14A2Q15849 920 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 AOC3Q16853 763 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 NLGN4XQ8N0W4 816 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 LZTR1Q8N653 840 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 PIM2Q9P1W9 311 aa6.83□□□□□ -1.32
CPSF6-206ENST00000550987 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms