RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RAP1GAPP47736 663 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF165P49910 485 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 GPR162Q16538 588 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 GAB4Q2WGN9 574 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 GORABQ5T7V8 394 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 CDCP2Q5VXM1 449 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 OLFM4Q6UX06 510 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 CREG2Q8IUH2 290 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.97□□□□□ -1.29
SCAF11-213ENST00000550629 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 TOX2Q96NM4 488 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 ALPK1Q96QP1 1244 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 PPP1R16BQ96T49 567 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 ASPNQ9BXN1 380 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 COA1Q9GZY4 146 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 ANTXR1Q9H6X2 564 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 IL1RAPL2Q9NP60 686 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 GPATCH2Q9NW75 528 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 DBNLQ9UJU6 430 aaKnown RBP6.97□□□□□ -1.29
SCAF11-213ENST00000550629 TTC41PQ6P2S7 1318 aa6.97□□□□□ -1.29
SCAF11-213ENST00000550629 FER1L6Q2WGJ9 1857 aa6.96□□□□□ -1.29
SCAF11-213ENST00000550629 ZNF503-AS2A6NEH8 195 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 ERC2O15083 957 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 IL1R1P14778 569 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 ATP5JP18859 108 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 MX1P20591 662 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 POLR2BP30876 1174 aaKnown RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 HIBADHP31937 336 aaKnown RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 IARSP41252 1262 aaKnown RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 AFMP43652 599 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 TIMM10P62072 90 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 RACK1P63244 317 aaKnown RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 CCDC158Q5M9N0 1113 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 FYB2Q5VWT5 728 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 TMED8Q6PL24 325 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 MPZL3Q6UWV2 235 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 TSPYL5Q86VY4 417 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 VPS37DQ86XT2 251 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 FAM84BQ96KN1 310 aaPredicted RBP6.96□□□□□ -1.3
SCAF11-213ENST00000550629 NEUROD6Q96NK8 337 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 CNNM2Q9H8M5 875 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 ECHDC1Q9NTX5 307 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 SLAMF8Q9P0V8 285 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 DUSP13Q9UII6 198 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 SALL3Q9BXA9 1300 aa6.96□□□□□ -1.3
SCAF11-213ENST00000550629 DNAJC25-GNG10A0A024R161 153 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 SHISA3A0PJX4 238 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 SCAMP3O14828 347 aaKnown RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 PPIP5K2O43314 1243 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 GLRX3O76003 335 aaKnown RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 KLRK1P26718 216 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 ADORA1P30542 326 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 GYG1P46976 350 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 MMP14P50281 582 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 CHMP4BP1P59074 171 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 RALGPS1Q5JS13 557 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 NLRC3Q7RTR2 1065 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 NIM1KQ8IY84 436 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 JDP2Q8WYK2 163 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 LIN37Q96GY3 246 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 LNPKQ9C0E8 428 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 CCDC8Q9H0W5 538 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 ZNF277Q9NRM2 450 aaPredicted RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 DDX41Q9UJV9 622 aaKnown RBP6.95□□□□□ -1.3
SCAF11-213ENST00000550629 ZNRF3Q9ULT6 936 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 CACNA1SQ13698 1873 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 FAM205AQ6ZU69 1335 aa6.95□□□□□ -1.3
SCAF11-213ENST00000550629 GOLGB1Q14789 3259 aaKnown RBP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 SNAP23O00161 211 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 ECE2O60344 883 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 TSPAN15O95858 294 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 GDNFP39905 211 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 PHKA1P46020 1223 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 PDE1AP54750 535 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 FKBP1AP62942 108 aaKnown RBP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 TTC39AQ5SRH9 613 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 STRIP1Q5VSL9 837 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 TTC6Q86TZ1 520 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 C16orf71Q8IYS4 520 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 SPATA5Q8NB90 893 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 ZSCAN18Q8TBC5 510 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 WDR66Q8TBY9 1149 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 TBC1D22AQ8WUA7 517 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 HAUS7Q99871 368 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCAF11-213ENST00000550629 CD209Q9NNX6 404 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 DENND2AQ9ULE3 1009 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 SUGT1Q9Y2Z0 365 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 SALL1Q9NSC2 1324 aa6.94□□□□□ -1.3
SCAF11-213ENST00000550629 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
SCAF11-213ENST00000550629 FZD9O00144 591 aa6.93□□□□□ -1.3
SCAF11-213ENST00000550629 FRAT2O75474 233 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-213ENST00000550629 GLI1P08151 1106 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms