RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 DGKIO75912 1065 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
PFDN5-210ENST00000550513 MMP1P03956 469 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 STAT5BP51692 787 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 ITGB3BPQ13352 177 aaPredicted RBP12.38□□□□□ -0.43
PFDN5-210ENST00000550513 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 CEP55Q53EZ4 464 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 PLPPR4Q7Z2D5 763 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 AGO4Q9HCK5 861 aaKnown RBP12.38□□□□□ -0.43
PFDN5-210ENST00000550513 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
PFDN5-210ENST00000550513 KLF18A0A0U1RQI7 1052 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 SMIM35A0A1B0GVV1 85 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 SMCO2A6NFE2 343 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
PFDN5-210ENST00000550513 NCK2O43639 380 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 ARP10275 920 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 SREBF1P36956 1147 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 SLC26A2P50443 739 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 FUT2Q10981 343 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 PAN2Q504Q3 1202 aaKnown RBP12.37□□□□□ -0.43
PFDN5-210ENST00000550513 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 CMTR2Q8IYT2 770 aaKnown RBP12.37□□□□□ -0.43
PFDN5-210ENST00000550513 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 GLT8D2Q9H1C3 349 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 PADI3Q9ULW8 664 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 ARIH1Q9Y4X5 557 aaPredicted RBP12.37□□□□□ -0.43
PFDN5-210ENST00000550513 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 MRPL42Q9Y6G3 142 aaKnown RBP12.37□□□□□ -0.43
PFDN5-210ENST00000550513 KMT2EQ8IZD2 1858 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
PFDN5-210ENST00000550513 COL1A2P08123 1366 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 PRR33A8MZF0 331 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 BACH1O14867 736 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 TBX10O75333 385 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 STAG3L1P0CL83 205 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 SCG2P13521 617 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 ALADP13716 330 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 ZNF76P36508 570 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
PFDN5-210ENST00000550513 KRT76Q01546 638 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 ZP2Q05996 745 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 HYAL1Q12794 435 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 KRT32Q14532 448 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 MTHFD1LQ6UB35 978 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 DHX32Q7L7V1 743 aaKnown RBP12.36□□□□□ -0.43
PFDN5-210ENST00000550513 NIPA1Q7RTP0 329 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 P2RX5Q93086 422 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 CELF4Q9BZC1 486 aaKnown RBP12.36□□□□□ -0.43
PFDN5-210ENST00000550513 PRKAG3Q9UGI9 489 aa12.36□□□□□ -0.43
PFDN5-210ENST00000550513 NAP1L2Q9ULW6 460 aaPredicted RBP12.36□□□□□ -0.43
PFDN5-210ENST00000550513 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
PFDN5-210ENST00000550513 IGKV6D-21A0A0A0MT36 114 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 MEIS1O00470 390 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ATG7O95352 703 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CCNE2O96020 404 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 IBSPP21815 317 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-210ENST00000550513 LTBRP36941 435 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 RCAN1P53805 252 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 FGD1P98174 961 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 EXOSC10Q01780 885 aaKnown RBP12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CLUL1Q15846 466 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CSPP1Q1MSJ5 1256 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CTC1Q2NKJ3 1217 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ADCK5Q3MIX3 580 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ADHFE1Q8IWW8 467 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 CRIPAKQ8N1N5 446 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ATP8B4Q8TF62 1192 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 PPP2R3CQ969Q6 453 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
PFDN5-210ENST00000550513 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 LRFN2Q9ULH4 789 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
PFDN5-210ENST00000550513 NID2Q14112 1375 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 DCXO43602 365 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 HBP1O60381 514 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 CDC45O75419 566 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 CDC27P30260 824 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 METAP2P50579 478 aaKnown RBP eCLIP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 DLX2Q07687 328 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 NFX1Q12986 1120 aaKnown RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 SMAD4Q13485 552 aaKnown RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 SMAD2Q15796 467 aaKnown RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
PFDN5-210ENST00000550513 TMEM266Q2M3C6 531 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 NAALADL2Q58DX5 795 aa12.34□□□□□ -0.43
PFDN5-210ENST00000550513 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms