RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CELF4Q9BZC1 486 aaKnown RBP26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 UPF3BQ9BZI7 483 aaKnown RBP26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 CNTNAP5Q8WYK1 1306 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 MYO7AQ13402 2215 aa26.3■■□□□ 1.8
SMARCD1-209ENST00000550477 SMIM35A0A1B0GVV1 85 aa26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 BACH1O14867 736 aa26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 GRM6O15303 877 aa26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 COL19A1Q14993 1142 aa26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 KHSRPQ92945 711 aaKnown RBP eCLIP26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 AGO3Q9H9G7 860 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 RC3H2Q9HBD1 1191 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 AGO4Q9HCK5 861 aaKnown RBP26.29■■□□□ 1.8
SMARCD1-209ENST00000550477 CCDC196A0A1B0GTZ2 297 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 PRR33A8MZF0 331 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 MEIS1O00470 390 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 HBP1O60381 514 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 ARP10275 920 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 KRT76Q01546 638 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 TMEM62Q0P6H9 643 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 BMP2KLQ5H9B9 411 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 MCTP2Q6DN12 878 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 NIPA1Q7RTP0 329 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 CYP2W1Q8TAV3 490 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 BARHL2Q9NY43 387 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 TCEAL9Q9UHQ7 104 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 NAP1L2Q9ULW6 460 aaPredicted RBP26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 PADI3Q9ULW8 664 aa26.28■■□□□ 1.8
SMARCD1-209ENST00000550477 FAM86C2PA6NEL3 165 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 GOLGA8AA7E2F4 631 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 GOLGA8BA8MQT2 603 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 ATG7O95352 703 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 MMP1P03956 469 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 SCG2P13521 617 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 RCAN1P53805 252 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 TSGA10IPQ3SY00 556 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 MTHFD1LQ6UB35 978 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 IGSF9BQ9UPX0 1349 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 KDM3AQ9Y4C1 1321 aa26.27■■□□□ 1.8
SMARCD1-209ENST00000550477 SREBF1P36956 1147 aa26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 EXOSC10Q01780 885 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 NFX1Q12986 1120 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 MIS18BP1Q6P0N0 1132 aa26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 CCDC12Q8WUD4 166 aaPredicted RBP26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 PGBD1Q96JS3 809 aa26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 POP1Q99575 1024 aaKnown RBP26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 PLAGL2Q9UPG8 496 aa26.26■■□□□ 1.79
SMARCD1-209ENST00000550477 KLF18A0A0U1RQI7 1052 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 STXBP3O00186 592 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 KLRC1P26715 233 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 COL9A3Q14050 684 aaPredicted RBP26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 PLA2G4DQ86XP0 818 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 ADHFE1Q8IWW8 467 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 TRAPPC12Q8WVT3 735 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 IGFLR1Q9H665 355 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 ZNF302Q9NR11 478 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 GINS2Q9Y248 185 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 PCDHB7Q9Y5E2 793 aa26.25■■□□□ 1.79
SMARCD1-209ENST00000550477 COL1A2P08123 1366 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 DDX39AO00148 427 aaKnown RBP26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 DCXO43602 365 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 LINC00271P0C7V0 271 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 ITGB3BPQ13352 177 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 CTC1Q2NKJ3 1217 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 ZNF484Q5JVG2 852 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 TYW1BQ6NUM6 668 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 RTN4RL1Q86UN2 441 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 ATP8B4Q8TF62 1192 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 ZBTB10Q96DT7 871 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 ALG13Q9NP73 1137 aaKnown RBP26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 C11orf16Q9NQ32 467 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 AAASQ9NRG9 546 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 BRPF3Q9ULD4 1205 aa26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 MRPL42Q9Y6G3 142 aaKnown RBP26.24■■□□□ 1.79
SMARCD1-209ENST00000550477 GPR182O15218 404 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 RPS6KA5O75582 802 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 HYAL1Q12794 435 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 PDXDC2PQ6P474 469 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 ABHD15Q6UXT9 468 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 CKAP2LQ8IYA6 745 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 TCEANC2Q96MN5 208 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 UIMC1Q96RL1 719 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 C6orf50Q9HD87 102 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 C1orf112Q9NSG2 853 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 TBC1D22BQ9NU19 505 aa26.23■■□□□ 1.79
SMARCD1-209ENST00000550477 IGKV6D-21A0A0A0MT36 114 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 DENND3A2RUS2 1198 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 CLK2P49760 499 aaKnown RBP26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 METAP2P50579 478 aaKnown RBP eCLIP26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 ZP2Q05996 745 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 SMAD2Q15796 467 aaKnown RBP26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 PAN2Q504Q3 1202 aaKnown RBP26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 SPOUT1Q5T280 376 aaKnown RBP26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 LINC01599Q8WXQ3 324 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 TMEM260Q9NX78 707 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 PCDHB12Q9Y5F1 795 aa26.22■■□□□ 1.79
SMARCD1-209ENST00000550477 IPO5O00410 1097 aaKnown RBP26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 CSPG5O95196 566 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 GNA11P29992 359 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 LTBRP36941 435 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 SARSP49591 514 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms