RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 MPIG6BO95866 241 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 ZSCAN22P10073 491 aaPredicted RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 PTX3P26022 381 aaPredicted RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 SOX5P35711 763 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 SARSP49591 514 aaKnown RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 IL2P60568 153 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 JAG1P78504 1218 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 SART3Q15020 963 aaKnown RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 PRAMEF18Q5VWM3 479 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 CARFQ8N187 725 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 HIPK4Q8NE63 616 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 WRNIP1Q96S55 665 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 INCENPQ9NQS7 918 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 ACSS2Q9NR19 701 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 SPO11Q9Y5K1 396 aa6.85□□□□□ -1.31
GNPTAB-207ENST00000550352 GOLGA6L22H0YM25 854 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 FBXO21O94952 628 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 IL13P35225 146 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 ADCYAP1R1P41586 468 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 KPNA1P52294 538 aaPredicted RBP6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 STRN3Q13033 797 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 DHCR24Q15392 516 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 LRSAM1Q6UWE0 723 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 KRT26Q7Z3Y9 468 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 FILIP1Q7Z7B0 1213 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 ZCCHC14Q8WYQ9 949 aaKnown RBP6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 AMNQ9BXJ7 453 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 KCND1Q9NSA2 647 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 SPTLC3Q9NUV7 552 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 ASB1Q9Y576 335 aa6.84□□□□□ -1.31
GNPTAB-207ENST00000550352 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 TGM5O43548 720 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 DNAJC6O75061 913 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 CYP7B1O75881 506 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 FKBP9O95302 570 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 CYP17A1P05093 508 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 COL6A1P12109 1028 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 ZNF28P17035 718 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 CNGA1P29973 690 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 FNTBP49356 437 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 SLURP1P55000 103 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 CT47A1Q5JQC4 288 aaPredicted RBP6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 ESRP1Q6NXG1 681 aaKnown RBP6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 TRMT10BQ6PF06 316 aaKnown RBP6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 FKBP9P1Q75LS8 142 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 RTN4RL1Q86UN2 441 aaPredicted RBP6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 EFHBQ8N7U6 833 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 FOXRED1Q96CU9 486 aaPredicted RBP6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 SPC25Q9HBM1 224 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 TOMM22Q9NS69 142 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 GALNT8Q9NY28 637 aa6.83□□□□□ -1.32
GNPTAB-207ENST00000550352 TRIM13O60858 407 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 KNG1P01042 644 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 BPIP17213 487 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 ID4P47928 161 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 LSSP48449 732 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 SMAD2Q15796 467 aaKnown RBP6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 RNF187Q5TA31 235 aaPredicted RBP6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 MCTP2Q6DN12 878 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 FAM177A1Q8N128 213 aaPredicted RBP6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 AFAP1L2Q8N4X5 818 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 ADAMTS17Q8TE56 1095 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 USP7Q93009 1102 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 C16orf92Q96LL3 132 aa6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 FAM126AQ9BYI3 521 aaPredicted RBP6.82□□□□□ -1.32
GNPTAB-207ENST00000550352 SHROOM4Q9ULL8 1493 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 NEMP1O14524 444 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 ECE1P42892 770 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 IL13RA1P78552 427 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 ZNF761Q86XN6 746 aaPredicted RBP6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 SIAH1Q8IUQ4 282 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 SYT8Q8NBV8 401 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 ZMAT4Q9H898 229 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 L2HGDHQ9H9P8 463 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 EMC7Q9NPA0 242 aa6.81□□□□□ -1.32
GNPTAB-207ENST00000550352 BMP7P18075 431 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 POU3F3P20264 500 aaPredicted RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 SMAD3P84022 425 aaKnown RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 OCRLQ01968 901 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 EPHA7Q15375 998 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 PASD1Q8IV76 773 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 MARCH10Q8NA82 808 aaPredicted RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 TXNDC5Q8NBS9 432 aaKnown RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 RTF1Q92541 710 aaKnown RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 YTHDC1Q96MU7 727 aaKnown RBP6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 TTC1Q99614 292 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 BTBD2Q9BX70 525 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 TMX1Q9H3N1 280 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 IFT22Q9H7X7 185 aa6.8□□□□□ -1.32
GNPTAB-207ENST00000550352 UBA6A0AVT1 1052 aaPredicted RBP6.79□□□□□ -1.32
GNPTAB-207ENST00000550352 H0Y858 1186 aa6.79□□□□□ -1.32
GNPTAB-207ENST00000550352 KLHL18O94889 574 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms