RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 IBSPP21815 317 aaPredicted RBP15.24■□□□□ 0.03
NUP188-211ENST00000550219 KCNA5P22460 613 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 CTNNB1P35222 781 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 SREBF1P36956 1147 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 ITGB3BPQ13352 177 aaPredicted RBP15.24■□□□□ 0.03
NUP188-211ENST00000550219 AP3B2Q13367 1082 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 CUL4AQ13619 759 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 PLCB4Q15147 1175 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 PTPROQ16827 1216 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 FBXO47Q5MNV8 452 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 TSHZ1Q6ZSZ6 1077 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 RPAINQ86UA6 219 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 HSCBQ8IWL3 235 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 TMEM192Q8IY95 271 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 MRPL38Q96DV4 380 aaKnown RBP15.24■□□□□ 0.03
NUP188-211ENST00000550219 NLRC5Q86WI3 1866 aa15.24■□□□□ 0.03
NUP188-211ENST00000550219 ADGRA3Q8IWK6 1321 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 RRN3P2A6NIE6 340 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 M0QZ92 97 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 BACH1O14867 736 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 PPFIA3O75145 1194 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 CD52P31358 61 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 ADD1P35611 737 aaKnown RBP15.23■□□□□ 0.03
NUP188-211ENST00000550219 STAT5BP51692 787 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 CCT2P78371 535 aaKnown RBP15.23■□□□□ 0.03
NUP188-211ENST00000550219 STK3Q13188 491 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 NTRK3Q16288 839 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 EP400NLQ6ZTU2 488 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 FIBCD1Q8N539 461 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 TRPV2Q9Y5S1 764 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 TTC28Q96AY4 2481 aa15.23■□□□□ 0.03
NUP188-211ENST00000550219 TRANK1O15050 2925 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 SCG2P13521 617 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 CLK2P49760 499 aaKnown RBP15.22■□□□□ 0.03
NUP188-211ENST00000550219 PFKFB3Q16875 520 aaPredicted RBP15.22■□□□□ 0.03
NUP188-211ENST00000550219 PLA2G4DQ86XP0 818 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 AGO3Q9H9G7 860 aaKnown RBP15.22■□□□□ 0.03
NUP188-211ENST00000550219 NCOA5Q9HCD5 579 aaKnown RBP15.22■□□□□ 0.03
NUP188-211ENST00000550219 RAPGEFL1Q9UHV5 662 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 GINS2Q9Y248 185 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 KAT6AQ92794 2004 aa15.22■□□□□ 0.03
NUP188-211ENST00000550219 POTEB3A0JP26 581 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 H3BNC9 293 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 CCNE2O96020 404 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 IFNAR1P17181 557 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
NUP188-211ENST00000550219 PAK2Q13177 524 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 BTG3Q14201 252 aaPredicted RBP15.21■□□□□ 0.03
NUP188-211ENST00000550219 IER5Q5VY09 327 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 FAM160B1Q5W0V3 765 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 POTEBQ6S5H4 581 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 BANK1Q8NDB2 785 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 LINC01599Q8WXQ3 324 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 TNPO1Q92973 898 aaKnown RBP15.21■□□□□ 0.03
NUP188-211ENST00000550219 PHKBQ93100 1093 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 LLPHQ9BRT6 129 aaKnown RBP15.21■□□□□ 0.03
NUP188-211ENST00000550219 GLT8D2Q9H1C3 349 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
NUP188-211ENST00000550219 MEIS1O00470 390 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 ENPP3O14638 875 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 ADAMTS3O15072 1205 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 RPLP2P05387 115 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 BECN1Q14457 450 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 PAN2Q504Q3 1202 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 PDXDC2PQ6P474 469 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 PLPPR4Q7Z2D5 763 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 TRMT1LQ7Z2T5 733 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 CCDC60Q8IWA6 550 aaPredicted RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 CCDC83Q8IWF9 413 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 REXO1Q8N1G1 1221 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 CCDC12Q8WUD4 166 aaPredicted RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 PPP1R16BQ96T49 567 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 NSUN3Q9H649 340 aaKnown RBP15.2■□□□□ 0.02
NUP188-211ENST00000550219 C6orf50Q9HD87 102 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 ZNF302Q9NR11 478 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 XIRP2A4UGR9 3374 aa15.2■□□□□ 0.02
NUP188-211ENST00000550219 H3BQ06 376 aaPredicted RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 IL9P15248 144 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 AKAP17AQ02040 695 aaKnown RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 TMEM266Q2M3C6 531 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 MIS18BP1Q6P0N0 1132 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 CPLX2Q6PUV4 134 aaKnown RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 MTHFD1LQ6UB35 978 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 NIPA1Q7RTP0 329 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 TEX2Q8IWB9 1127 aa15.19■□□□□ 0.02
NUP188-211ENST00000550219 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
NUP188-211ENST00000550219 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms