RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	CAP1	Q01518	475 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	MCM6	Q14566	821 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	ECM1	Q16610	540 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	ZSCAN23	Q3MJ62	389 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	HSDL1	Q3SXM5	330 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	XKR3	Q5GH77	459 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	CCDC60	Q8IWA6	550 aa	Predicted RBP	12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	AFAP1L1	Q8TED9	768 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	SMARCE1	Q969G3	411 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	PAGE5	Q96GU1	130 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	SMARCAD1	Q9H4L7	1026 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	BCAS3	Q9H6U6	928 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	BLOC1S4	Q9NUP1	217 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	KBTBD4	Q9NVX7	518 aa		12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	DBR1	Q9UK59	544 aa	Known RBP	12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	ZNF215	Q9UL58	517 aa	Predicted RBP	12.96	□□□□□ -0.33
CNOT2-223	ENST00000550160	IGKV6D-21	A0A0A0MT36	114 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	ARHGEF35	A5YM69	484 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160		E9PMD0	336 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	DYNC1LI2	O43237	492 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	MSC	O60682	206 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	DUSP11	O75319	330 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	PPFIA4	O75335	1185 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	LGR5	O75473	907 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	KRT18	P05783	430 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	YWHAB	P31946	246 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	CTCF	P49711	727 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	PRKCE	Q02156	737 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	CACNB2	Q08289	660 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	DHX8	Q14562	1220 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	DGKD	Q16760	1214 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	GJC2	Q5T442	439 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	UTP14C	Q5TAP6	766 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	SASS6	Q6UVJ0	657 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	CHRDL2	Q6WN34	429 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	PLPPR4	Q7Z2D5	763 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	KCNK18	Q7Z418	384 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	SH3RF1	Q7Z6J0	888 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	AFG1L	Q8WV93	481 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	BHMT2	Q9H2M3	363 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	NRBP2	Q9NSY0	501 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	ANKEF1	Q9NU02	776 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	RMND1	Q9NWS8	449 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	KCND2	Q9NZV8	630 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	KIAA1468	Q9P260	1216 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	GNE	Q9Y223	722 aa	Known RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	PTCH2	Q9Y6C5	1203 aa		12.95	□□□□□ -0.34
CNOT2-223	ENST00000550160	ZEB2	O60315	1214 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	OAT	P04181	439 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	ASIC1	P78348	528 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	PNOC	Q13519	176 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	UGCG	Q16739	394 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	RBM43	Q6ZSC3	357 aa	Known RBP	12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	GPBP1	Q86WP2	473 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	GRAMD1C	Q8IYS0	662 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	SYT2	Q8N9I0	419 aa	Predicted RBP	12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	PIGO	Q8TEQ8	1089 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	GSDMA	Q96QA5	445 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	GTPBP4	Q9BZE4	634 aa	Known RBP	12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	HMX1	Q9NP08	348 aa	Predicted RBP	12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	ERAP1	Q9NZ08	941 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	PTPN22	Q9Y2R2	807 aa		12.94	□□□□□ -0.34
CNOT2-223	ENST00000550160	SYCE3	A1L190	88 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160		A6NJR5	290 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	KPNA6	O60684	536 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	INHA	P05111	366 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	LGALS2	P05162	132 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	MMP3	P08254	477 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	CCDC192	P0DO97	292 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	HSPA8	P11142	646 aa	Known RBP	12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	HOXD8	P13378	290 aa	Predicted RBP	12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	SLC12A3	P55017	1021 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	PSMC6	P62333	389 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	MDM2	Q00987	491 aa	Predicted RBP	12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	DPYD	Q12882	1025 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	XKR9	Q5GH70	373 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	TMEM63B	Q5T3F8	832 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	MAP3K21	Q5TCX8	1036 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	CNNM4	Q6P4Q7	775 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	TRIML1	Q8N9V2	468 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	TRPV1	Q8NER1	839 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	BBX	Q8WY36	941 aa	Predicted RBP	12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	DDX12P	Q92771	950 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	STAM	Q92783	540 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	C7orf25	Q9BPX7	421 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	TRIM9	Q9C026	710 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	PPME1	Q9Y570	386 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	PCDHA5	Q9Y5H7	936 aa		12.93	□□□□□ -0.34
CNOT2-223	ENST00000550160	PVALEF	A0A1B0GWK0	134 aa		12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	FOXN1	O15353	648 aa		12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	ADCY6	O43306	1168 aa		12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	ZNF862	O60290	1169 aa		12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	TBCA	O75347	108 aa	Known RBP	12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	RPN1	P04843	607 aa	Known RBP	12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	C6orf222	P0C671	652 aa	Predicted RBP	12.92	□□□□□ -0.34
CNOT2-223	ENST00000550160	HSPA1A	P0DMV8	641 aa	Known RBP	12.92	□□□□□ -0.34

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