RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 NOP58Q9Y2X3 529 aaKnown RBP6.77□□□□□ -1.33
PFDN5-209ENST00000550069 SUGT1Q9Y2Z0 365 aa6.77□□□□□ -1.33
PFDN5-209ENST00000550069 LAS1LQ9Y4W2 734 aaKnown RBP6.77□□□□□ -1.33
PFDN5-209ENST00000550069 N4BP2Q86UW6 1770 aaPredicted RBP6.77□□□□□ -1.33
PFDN5-209ENST00000550069 KIF16BQ96L93 1317 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 DICER1Q9UPY3 1922 aaKnown RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 A0A0U1RQG5 324 aaPredicted RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 H0YIN7 160 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 FGF10O15520 208 aaPredicted RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 PAX4O43316 350 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 SUSD5O60279 629 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 KCNH1O95259 989 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 MSL3P1P0C860 447 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 EIF2S2P20042 333 aaKnown RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 NR0B2Q15466 257 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 DDR2Q16832 855 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 CWF19L1Q69YN2 538 aaKnown RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 KSR2Q6VAB6 950 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 COPS6Q7L5N1 327 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 NBPF5PQ86XG9 351 aaPredicted RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 OXR1Q8N573 874 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 TANGO6Q9C0B7 1094 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 MIS18AQ9NYP9 233 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 NIP7Q9Y221 180 aaKnown RBP eCLIP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 DIS3Q9Y2L1 958 aaKnown RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 SF3B6Q9Y3B4 125 aaKnown RBP6.76□□□□□ -1.33
PFDN5-209ENST00000550069 EMC9Q9Y3B6 208 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 KIAA1551Q9HCM1 1747 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 SH3TC1Q8TE82 1336 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 CDHR2Q9BYE9 1310 aa6.76□□□□□ -1.33
PFDN5-209ENST00000550069 ANKRD31Q8N7Z5 1873 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 LRRC10BA6NIK2 292 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 AURKAO14965 403 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 NPHP1O15259 732 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 IPO8O15397 1037 aaKnown RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 NRDCO43847 1150 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 PPM1BO75688 479 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 ALDH1L1O75891 902 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 NPR1P16066 1061 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 MESP2Q0VG99 397 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 NCAPHQ15003 741 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 SF1Q15637 639 aaKnown RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 CRY2Q49AN0 593 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 LINS1Q8NG48 757 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 BTN2A2Q8WVV5 523 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 MASTLQ96GX5 879 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 MRGPRX3Q96LB0 322 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 NAP1L5Q96NT1 182 aaPredicted RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 KRTAP4-12Q9BQ66 201 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 ISCA1Q9BUE6 129 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 UTP14AQ9BVJ6 771 aaKnown RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 TMX4Q9H1E5 349 aaPredicted RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 CHMP4BQ9H444 224 aaKnown RBP6.75□□□□□ -1.33
PFDN5-209ENST00000550069 CHPF2Q9P2E5 772 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 IMPACTQ9P2X3 320 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 FBLN5Q9UBX5 448 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 AKT3Q9Y243 479 aa6.75□□□□□ -1.33
PFDN5-209ENST00000550069 ARNTLO00327 626 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 ITGAVP06756 1048 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 KIR2DL1P43626 348 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 KIR2DL2P43627 348 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 RTP1P59025 263 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 CHRNEQ04844 493 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 DDR1Q08345 913 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 FXNQ16595 210 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 SLC10A6Q3KNW5 377 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 TBC1D9BQ66K14 1250 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 PRR5LQ6MZQ0 368 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 MPZL3Q6UWV2 235 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 AMIGO3Q86WK7 504 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 ZNF227Q86WZ6 799 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 TTLL6Q8N841 843 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 C8orf58Q8NAV2 365 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 INTS4Q96HW7 963 aaKnown RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 RCC1LQ96I51 464 aaKnown RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 PTCHD1Q96NR3 888 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 CRAMP1Q96RY5 1269 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 APBA2Q99767 749 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 PDGFDQ9GZP0 370 aaPredicted RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 NSUN3Q9H649 340 aaKnown RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 GPRC5CQ9NQ84 441 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 YBX2Q9Y2T7 364 aaKnown RBP6.74□□□□□ -1.33
PFDN5-209ENST00000550069 FER1L6Q2WGJ9 1857 aa6.74□□□□□ -1.33
PFDN5-209ENST00000550069 SBF1O95248 1867 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 RTL9Q8NET4 1388 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 BBOX1O75936 387 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 PCCAP05165 728 aaPredicted RBP6.73□□□□□ -1.33
PFDN5-209ENST00000550069 SRGNP10124 158 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 MYL6BP14649 208 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 GRIA2P42262 883 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 MMP14P50281 582 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 POU4F1Q01851 419 aa6.73□□□□□ -1.33
PFDN5-209ENST00000550069 EXOSC9Q06265 439 aaKnown RBP6.73□□□□□ -1.33
PFDN5-209ENST00000550069 RAB33AQ14088 237 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms