RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 NAT2P11245 290 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 PMLP29590 882 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 WWC2Q6AWC2 1192 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 KIAA1211LQ6NV74 962 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 POMZP3Q6PJE2 187 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 BORCS6Q96GS4 357 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 PCDH18Q9HCL0 1135 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 EMC9Q9Y3B6 208 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 PIK3C2AO00443 1686 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 QRICH2Q9H0J4 1663 aa6.79□□□□□ -1.32
SYT1-208ENST00000549671 NPHS1O60500 1241 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 PPP1R11O60927 126 aaPredicted RBP6.78□□□□□ -1.32
SYT1-208ENST00000549671 NFKB2Q00653 900 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 CACNB2Q08289 660 aaPredicted RBP6.78□□□□□ -1.32
SYT1-208ENST00000549671 FSTL1Q12841 308 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 VHLLQ6RSH7 139 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 DPH6Q7L8W6 267 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 ZDHHC14Q8IZN3 488 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 ADAM7Q9H2U9 754 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 TFCP2L1Q9NZI6 479 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 JAG2Q9Y219 1238 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 RWDD3Q9Y3V2 267 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 PCNTO95613 3336 aa6.78□□□□□ -1.32
SYT1-208ENST00000549671 NFAT5O94916 1531 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 C7orf72A4D263 438 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 ADRB1P08588 477 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 MC3RP41968 323 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 NCAPHQ15003 741 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 DPY19L1Q2PZI1 675 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 PRRT2Q7Z6L0 340 aaPredicted RBP6.77□□□□□ -1.33
SYT1-208ENST00000549671 ARHGEF25Q86VW2 580 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 VPS37DQ86XT2 251 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 LINC00482Q8N8I6 264 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 SLC43A3Q8NBI5 491 aa6.77□□□□□ -1.33
SYT1-208ENST00000549671 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
SYT1-208ENST00000549671 HSP90B1P14625 803 aaKnown RBP6.76□□□□□ -1.33
SYT1-208ENST00000549671 DNAJA1P31689 397 aaKnown RBP6.76□□□□□ -1.33
SYT1-208ENST00000549671 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
SYT1-208ENST00000549671 ETFBP38117 255 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 GIMAP6Q6P9H5 292 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 COL23A1Q86Y22 540 aaPredicted RBP6.76□□□□□ -1.33
SYT1-208ENST00000549671 DCP2Q8IU60 420 aaKnown RBP6.76□□□□□ -1.33
SYT1-208ENST00000549671 CARFQ8N187 725 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 Q8N1Y9 231 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 BVESQ8NE79 360 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 PLEKHO2Q8TD55 490 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 APEX2Q9UBZ4 518 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 AKT3Q9Y243 479 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 SUGT1Q9Y2Z0 365 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 NSD2O96028 1365 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 USP54Q70EL1 1684 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 RGPD5Q99666 1765 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 IGSF1Q8N6C5 1336 aa6.76□□□□□ -1.33
SYT1-208ENST00000549671 PXDNLA1KZ92 1463 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 NOBOXO60393 691 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 HSPA1AP0DMV8 641 aaKnown RBP6.75□□□□□ -1.33
SYT1-208ENST00000549671 HSPA1BP0DMV9 641 aaKnown RBP6.75□□□□□ -1.33
SYT1-208ENST00000549671 ATP2B1P20020 1258 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 SLC6A11P48066 632 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 CPNE8Q86YQ8 564 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 MIB1Q86YT6 1006 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 TRIM59Q8IWR1 403 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 SMARCC2Q8TAQ2 1214 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 APBA2Q99767 749 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 LNPKQ9C0E8 428 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 NMRK2Q9NPI5 230 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 CYP26B1Q9NR63 512 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 NTMQ9P121 344 aa6.75□□□□□ -1.33
SYT1-208ENST00000549671 ANKRD36BQ8N2N9 1353 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 KIAA1551Q9HCM1 1747 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
SYT1-208ENST00000549671 SSBP05455 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYT1-208ENST00000549671 RTP5Q14D33 572 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 TESK1Q15569 626 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 NT5DC1Q5TFE4 455 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 RIOX2Q8IUF8 465 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 MRGPRX3Q96LB0 322 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 SPATA25Q9BR10 227 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 NKX2-4Q9H2Z4 354 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 USP40Q9NVE5 1235 aa6.74□□□□□ -1.33
SYT1-208ENST00000549671 TOGARAM1Q9Y4F4 1720 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 PLEKHG2Q9H7P9 1386 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 A0A1B0GTL3 188 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 PLS3P13797 630 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 IL2RBP14784 551 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 SCRN1Q12765 414 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 E4F1Q66K89 784 aaPredicted RBP6.73□□□□□ -1.33
SYT1-208ENST00000549671 MBLAC2Q68D91 279 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 IQCEQ6IPM2 695 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 KCNH5Q8NCM2 988 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.73□□□□□ -1.33
SYT1-208ENST00000549671 LGR4Q9BXB1 951 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 SPATA6Q9NWH7 488 aaPredicted RBP6.73□□□□□ -1.33
SYT1-208ENST00000549671 C5P01031 1676 aa6.73□□□□□ -1.33
SYT1-208ENST00000549671 TNRC6CQ9HCJ0 1690 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms