RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MYH7BA7E2Y1 1941 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 MYMKA6NI61 221 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 COPB2P35606 906 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 ECE1P42892 770 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 FBXO11Q86XK2 927 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 SPATA4Q8NEY3 305 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 AP1M1Q9BXS5 423 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 TRIM9Q9C026 710 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 MAGEA9P43362 315 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 IRAK1P51617 712 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 KIF11P52732 1056 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 CKAP4Q07065 602 aaKnown RBP12.18□□□□□ -0.46
LINC00661-204ENST00000549354 TNFAIP1Q13829 316 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 DDX42Q86XP3 938 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00661-204ENST00000549354 FAM133AQ8N9E0 248 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 OR2W6PQ8NHA6 318 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 SH2D4AQ9H788 454 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 NFU1Q9UMS0 254 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 JRKLQ9Y4A0 524 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 PCDHA13Q9Y5I0 950 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
LINC00661-204ENST00000549354 OPLAHO14841 1288 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 TACC1O75410 805 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 GUCY2DQ02846 1103 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 RASA3Q14644 834 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 PAPD7Q5XG87 772 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 CREG2Q8IUH2 290 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 HAS1Q92839 578 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 RANBP17Q9H2T7 1088 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 SEMA6BQ9H3T3 888 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 FOSP01100 380 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 ASNSP08243 561 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 EEF1GP26641 437 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 GMPSP49915 693 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 ZBED6P86452 979 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 KIAA0895Q8NCT3 520 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 DEFB129Q9H1M3 183 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 EBAG9O00559 213 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 FAM153BP0C7A2 387 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 STAT2P52630 851 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 FAM153CQ494X1 144 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 GJB7Q6PEY0 223 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 GIMAP8Q8ND71 665 aaPredicted RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 TBC1D5Q92609 795 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 DDX12PQ92771 950 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 P2RX7Q99572 595 aaKnown RBP12.17□□□□□ -0.46
LINC00661-204ENST00000549354 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 KCNMB3Q9NPA1 279 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 FAM153AQ9UHL3 310 aa12.17□□□□□ -0.46
LINC00661-204ENST00000549354 EGFRP00533 1210 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 ABCB4P21439 1286 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 FECHP22830 423 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CARSP49589 748 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 VAV2P52735 878 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CORO7P57737 925 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 HYIQ5T013 277 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 FAM160B2Q86V87 743 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 KRT12Q99456 494 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 ANO3Q9BYT9 981 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 SNX12Q9UMY4 172 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 PCDHB13Q9Y5F0 798 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 ZC3H4Q9UPT8 1303 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 POTEB3A0JP26 581 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 POTECB2RU33 542 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 H0YHG0 523 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 DDX39AO00148 427 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 SORBS3O60504 671 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CIITAP33076 1130 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 USP8P40818 1118 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 C8orf74Q6P047 294 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 POTEBQ6S5H4 581 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 IPO4Q8TEX9 1081 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CHURC1Q8WUH1 139 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 LSM14BQ9BX40 385 aaKnown RBP12.16□□□□□ -0.46
LINC00661-204ENST00000549354 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 FAM169AQ9Y6X4 670 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 NDUFAB1O14561 156 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CYP3A4P08684 503 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 CCNE1P24864 410 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 SREBF1P36956 1147 aa12.16□□□□□ -0.46
LINC00661-204ENST00000549354 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms