RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 EDIL3O43854 480 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 GHRP10912 638 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 ERVK-21P61565 698 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 LPIN1Q14693 890 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 ANKRD1Q15327 319 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 CCDC85BQ15834 202 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 FBXO47Q5MNV8 452 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 SWSAP1Q6NVH7 229 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 PDXDC2PQ6P474 469 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 NME8Q8N427 588 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 DAGLBQ8NCG7 672 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 TGS1Q96RS0 853 aaKnown RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 COL25A1Q9BXS0 654 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 PCDHA10Q9Y5I2 948 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 MAFBQ9Y5Q3 323 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 MTCH2Q9Y6C9 303 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 CDY2AQ9Y6F7 541 aa21.14■□□□□ 0.97
CHMP1A-207ENST00000549328 COL1A2P08123 1366 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 M0R2N6 131 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 ZNF484Q5JVG2 852 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 MTHFD1LQ6UB35 978 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 TSHZ1Q6ZSZ6 1077 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 BLIDQ8IZY5 108 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 SP7Q8TDD2 431 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 TRAPPC12Q8WVT3 735 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 ATXN2LQ8WWM7 1075 aaKnown RBP21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 RIT2Q99578 217 aa21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 FAM49AQ9H0Q0 323 aaPredicted RBP21.13■□□□□ 0.97
CHMP1A-207ENST00000549328 PRRC2BQ5JSZ5 2229 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 RBAK-RBAKDNI3L0D1 243 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 M0QZ92 97 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 PFKFB2O60825 505 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 PSAPP07602 524 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 KLRC1P26715 233 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 SCRN1Q12765 414 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 GRB10Q13322 594 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 SPRED2Q7Z698 418 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 TBCKQ8TEA7 893 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 BBXQ8WY36 941 aaPredicted RBP21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 SYMPKQ92797 1274 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 ZBTB10Q96DT7 871 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 UIMC1Q96RL1 719 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 TSPYL2Q9H2G4 693 aaPredicted RBP21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 LMCD1Q9NZU5 365 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 TPCN1Q9ULQ1 816 aa21.12■□□□□ 0.97
CHMP1A-207ENST00000549328 KDM3AQ9Y4C1 1321 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 CYP3A7-CYP3A51PA0A087WV96 503 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 MSH4O15457 936 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 ATP4AP20648 1035 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 CYP3A7P24462 503 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 NPY5RQ15761 445 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 FAM43BQ6ZT52 329 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 PRDM6Q9NQX0 595 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 THEGQ9P2T0 379 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 TRPV2Q9Y5S1 764 aa21.11■□□□□ 0.97
CHMP1A-207ENST00000549328 STK36Q9NRP7 1315 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 WDR64B1ANS9 1081 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 LPXNO60711 386 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 XBP1P17861 261 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 Q4G0T1 1027 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 TJAP1Q5JTD0 557 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 MOXD1Q6UVY6 613 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 CKAP2LQ8IYA6 745 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 SLC5A5Q92911 643 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 YME1L1Q96TA2 773 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 CELF4Q9BZC1 486 aaKnown RBP21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 SUGCTQ9HAC7 445 aa21.1■□□□□ 0.97
CHMP1A-207ENST00000549328 SIP14410 1827 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 VCANP13611 3396 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 ZBTB42B2RXF5 422 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 ENPP3O14638 875 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 GAS7O60861 476 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 UPP2O95045 317 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 SFNP31947 248 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 AK2P54819 239 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 KRT25Q7Z3Z0 450 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 MICALL1Q8N3F8 863 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 FAM167AQ96KS9 214 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 SAMD11Q96NU1 681 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 PHF20Q9BVI0 1012 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 FTHL17Q9BXU8 183 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 AGO3Q9H9G7 860 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 DISC1Q9NRI5 854 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 GABBR1Q9UBS5 961 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 CEP131Q9UPN4 1083 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 SAMM50Q9Y512 469 aa21.09■□□□□ 0.97
CHMP1A-207ENST00000549328 MYH9P35579 1960 aaKnown RBP21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 IGSF9BQ9UPX0 1349 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 TMEM62Q0P6H9 643 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 NONOQ15233 471 aaKnown RBP eCLIP21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 LRCH2Q5VUJ6 765 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 KIAA0319LQ8IZA0 1049 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 MBOAT7Q96N66 472 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 TEKT3Q9BXF9 490 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 MTUS1Q9ULD2 1270 aa21.08■□□□□ 0.97
CHMP1A-207ENST00000549328 COL4A6Q14031 1691 aa21.08■□□□□ 0.96
CHMP1A-207ENST00000549328 PSMD10O75832 226 aa21.07■□□□□ 0.96
CHMP1A-207ENST00000549328 CD52P31358 61 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms