RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 SPTBN4Q9H254 2564 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 RALGAPA2Q2PPJ7 1873 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 MAFGO15525 162 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 FIBPO43427 364 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 IRS1P35568 1242 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 THPOP40225 353 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 NLRP5P59047 1200 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 SP2Q02086 613 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 CTC1Q2NKJ3 1217 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 JAKMIP3Q5VZ66 844 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 GALNT17Q6IS24 598 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 DHX37Q8IY37 1157 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 REXO1Q8N1G1 1221 aaKnown RBP17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 GPRASP2Q96D09 838 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
CHMP1A-206ENST00000549139 LINC00271P0C7V0 271 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 XBP1P17861 261 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 SREBF1P36956 1147 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 SEMA3FQ13275 785 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 NEDD9Q14511 834 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 HSDL1Q3SXM5 330 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 NSUN7Q8NE18 718 aaKnown RBP17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 WASF1Q92558 559 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 CDHR1Q96JP9 859 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 PGBD1Q96JS3 809 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 YME1L1Q96TA2 773 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 SENP7Q9BQF6 1050 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 JADE2Q9NQC1 790 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 SH2B1Q9NRF2 756 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 ORC3Q9UBD5 711 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 PTPRZ1P23471 2315 aaPredicted RBP17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 CFAP54Q96N23 3096 aa17.89■□□□□ 0.45
CHMP1A-206ENST00000549139 ADAMTS3O15072 1205 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 ST18O60284 1047 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 GGPS1O95749 300 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 CYP3A4P08684 503 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 FDPSP14324 419 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 ITGB5P18084 799 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 SMAD2Q15796 467 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 DAGLBQ8NCG7 672 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 CRYGNQ8WXF5 182 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 MXRA8Q9BRK3 442 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 MLXIPQ9HAP2 919 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 CLDND1Q9NY35 253 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 PCDHA4Q9UN74 947 aa17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 RIF1Q5UIP0 2472 aaKnown RBP17.88■□□□□ 0.45
CHMP1A-206ENST00000549139 NCK2O43639 380 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 ARHGAP4P98171 946 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 DLX2Q07687 328 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 ST3GAL1Q11201 340 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 HERC4Q5GLZ8 1057 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 EP400NLQ6ZTU2 488 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 RPAINQ86UA6 219 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 GIMAP8Q8ND71 665 aaPredicted RBP17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 SEPT8Q92599 483 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 SNX27Q96L92 541 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 LLPHQ9BRT6 129 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 PHF20Q9BVI0 1012 aa17.87■□□□□ 0.45
CHMP1A-206ENST00000549139 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 C17orf102A2RUQ5 167 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 C5orf67F2Z3F1 127 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 M0R2N6 131 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 TREHO43280 583 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 UPP2O95045 317 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 MTMR1Q13613 665 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 NPY5RQ15761 445 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 CEP55Q53EZ4 464 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 NIPA1Q7RTP0 329 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 BLIDQ8IZY5 108 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 ATP6V0A1Q93050 837 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 MFSD14AQ96MC6 490 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 SPATA33Q96N06 139 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 PHOX2BQ99453 314 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 MUTYHQ9UIF7 546 aa17.86■□□□□ 0.45
CHMP1A-206ENST00000549139 MEIS1O00470 390 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 MBTPS2O43462 519 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 SORBS3O60504 671 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 ATP9AO75110 1047 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 CAND2O75155 1236 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 ZNF76P36508 570 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 HYAL1Q12794 435 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 METTL7BQ6UX53 244 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 CCDC83Q8IWF9 413 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 RASGRP4Q8TDF6 673 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 IFIH1Q9BYX4 1025 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 RNPEPQ9H4A4 650 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 BCAS3Q9H6U6 928 aa17.85■□□□□ 0.45
CHMP1A-206ENST00000549139 GRM6O15303 877 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 DTNBO60941 627 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 SMIM10L2AP0DMW4 78 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 SMIM10L2BP0DMW5 78 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 KCNA2P16389 499 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 MCM2P49736 904 aa17.84■□□□□ 0.45
CHMP1A-206ENST00000549139 USP11P51784 963 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms